Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04404 ATGCTCTTCTTTCTTATCACTCTCTTAAcaatctcttctttttcttcatcacAACCTTCTTACAAAGATCACTGTTCTTCCATAATCAAAGAGTCAACTCCCAAAAACCTCATCATCCATAACTCTTTCCCTCTTGGAGGTTACTTCACAGGAGGTTCTGAAATCATCCATCATGAAACTTCATTCATCAAATACTCTTCCTTTTACCTTAGACATATAAAAATGCATGAAACTATAAACATTAACTTGTTCAAAGTTGAATCCACTGTTTCATTCAGAACCAATCCAAACACAGTTTACTATCATGTATCAAACTTTAGCTATGGTAATAAACCAAGTTATCAAAGTCAACGCCACTTCCAAACAAGTTATGTTACTTTTAACCTTGAAGGGTTTTGGTCAAAATCTTCAGGAAAAGTTTGCATGGTTGGAACAGGAATTAGTTATTCTCAAAAAGGTGATTCTCTTAATCATGATGCTGTTTTTAAGCTTAACAATGTTTTCAATTCAAGTAACATCACTAGTTTGATTAGTGGAAGTTTAGAGAGTTTGAATTCTGAAAAGGGTGATGAGAAAAATCAATACTTTGAAACCATTTCTTTAGTGATGTTTCCAAAAgcaaattatatttatagtttGGATTCTAAAGAAGTTGAAAATGAATTCTCTTTTGAAAGTaaagtttatgagaaaaagGGTTTGTCACTAAATCAatattcatcaagtttttgttCATTACCACTCTCAAGAGCTATTAGAAGACTTCAACTAGAGTACACTAATGAATGCAATTCTTCAATGAATTGCAGTCCTATAATTAGTGATCAATTGCCATATATGATGTCTTTGAAAGGTGCTGAATGTTCTCATACAGATAAACATAGGTTGAAGGTTAAGATGgtattttcaaataaaagtgATTATTGGATTGAAAAAGGTTTCAATCCAAAAACTATGTTGATAGGGGAAGGATGGTGGGATGAGAATAAAACTGCTTTATATGTAGTTGCTTGTCATTTCATTGGCATCATGAAATCATCTTGGGATGGTACTCGTATTGGCGATTGCTCGGTAAGATTGAGATTGAGTTTCCCTTCGGTTTGGTCGATCGAAAATACTAATAGCATTGTTGGACAAATTTGGAGCAACAAGACTGCTAATGATCCAAACTACTTCAAGAtgataaaatttagaaatttcgACGATGCTAGGGTTGCATATCGAGCGTCAAAGTACGAGTATAGCAAGCTTGAAAGAGTTAAGAAATCATGTCCAACACAGAAGGTTGTCAAGAACAAAGAGAGAACAAGATTTCCAAATGTTTATTCTTATGATATGAGATTTGATATGTCAGTTAGAGATATAGAGTCCAATATAAAAGTAGCATTTGGTTCTTCAGCTCCTTTATCTATTGGTGATCAAATTTATGATGTTCCTGCTTATACTTCAAACTTCACAGCAGAATCTCCTATGGTGATGTTCAACAATGTTAGCATGTTTAACATTAGCTACAAGATTACCTTATTTTCTAATTCAACTTTATATGACAGGAATTCAGTGTTCAATTTGTCTTCTTATAGAGTGAAGATTTCTGCAGAAGGAATTTATGATGCTAGAACAGGAACTTTGTGTATGATTGGTTGCCGCGATCTTAACTCAAAAGCTGGAACACCATTAGCCGGATCTGTCGACTGTGAGATTCTATTGAAGTTTCAGTTTCCATCATTGGATACAACAAATGGAAGCCACATTAAAGGAAGTATCGAAAGCACACGCAAAAAATCAGATCCTCTTTACTTCAAAAGTTTAGAGGTATCTTCGTATGAAATTTACTCGGAAACAGCGATAAAAGCTGTTTGGAGAATGGATATGGAGATTATCATGGTTCTGATATCTACCACTTTATCATGTGTTTTCATCGGATTGCAACTATACCATGTGAAGAGAAATCCTAATGTGCTTCCCCTAATCTCAATTTTCATGATGTCAATTCTCACATTAGGTCACATGATACCacttgttttcaattttgaagcaattcttgatcaaaattttaacaacaaaaactTTGTGTTTGGATATGTTGGATGGCTTGAAGTTAATGAAATATCTGTAAGAATAATCACCATGGTTGCTTTCTTGTTGCAATTCCGTCTCCTTCAACTAACTTGGTCATCAAGAAAGACTAACGAAAGCGAGAACAGACTCTGGATTGCTGAGAGAAAGGCTACCTATGTGACGTTCCCCTTGTATGCAGCTGGATTATTGATTTCATTGCTTTTGAAGTTGAAAAGAGATGATTTTCAAAATGATTCATCTTGGGAGAACATGAAATCTTACGGTGGTTTGGTATTGGATGGATTTCTTGTGCCACAAGTCATTCTAAACCTGTTTTCAAATATGAATGAGAATGTTCTTTCATGTTCATTTTACTTTGGAACTACTTTTGTTAGACTTTTGCCACATGCATATGATCTTTACAGGGCTAGTAATTATGCTCGACTCAGCGATGGATCGTACTTCTATGCAAATCCAAATGCAGACTTTTACTCCACTACTTGGGATATTGTCATTCCTTTGGGAGGTATCCTATTTGCAATCATTATCTACTTGCAGCAACGTTTTGGTGCTCAATGTGTTCTACCTCAAAGATTCAAAGGGTCAAAATATGAAAAGGTGTCTGTGGTGGCTGAATCAGAAGCTTAA 2706 0.3322 MLFFLITLLTISSFSSSQPSYKDHCSSIIKESTPKNLIIHNSFPLGGYFTGGSEIIHHETSFIKYSSFYLRHIKMHETININLFKVESTVSFRTNPNTVYYHVSNFSYGNKPSYQSQRHFQTSYVTFNLEGFWSKSSGKVCMVGTGISYSQKGDSLNHDAVFKLNNVFNSSNITSLISGSLESLNSEKGDEKNQYFETISLVMFPKANYIYSLDSKEVENEFSFESKVYEKKGLSLNQYSSSFCSLPLSRAIRRLQLEYTNECNSSMNCSPIISDQLPYMMSLKGAECSHTDKHRLKVKMVFSNKSDYWIEKGFNPKTMLIGEGWWDENKTALYVVACHFIGIMKSSWDGTRIGDCSVRLRLSFPSVWSIENTNSIVGQIWSNKTANDPNYFKMIKFRNFDDARVAYRASKYEYSKLERVKKSCPTQKVVKNKERTRFPNVYSYDMRFDMSVRDIESNIKVAFGSSAPLSIGDQIYDVPAYTSNFTAESPMVMFNNVSMFNISYKITLFSNSTLYDRNSVFNLSSYRVKISAEGIYDARTGTLCMIGCRDLNSKAGTPLAGSVDCEILLKFQFPSLDTTNGSHIKGSIESTRKKSDPLYFKSLEVSSYEIYSETAIKAVWRMDMEIIMVLISTTLSCVFIGLQLYHVKRNPNVLPLISIFMMSILTLGHMIPLVFNFEAILDQNFNNKNFVFGYVGWLEVNEISVRIITMVAFLLQFRLLQLTWSSRKTNESENRLWIAERKATYVTFPLYAAGLLISLLLKLKRDDFQNDSSWENMKSYGGLVLDGFLVPQVILNLFSNMNENVLSCSFYFGTTFVRLLPHAYDLYRASNYARLSDGSYFYANPNADFYSTTWDIVIPLGGILFAIIIYLQQRFGAQCVLPQRFKGSKYEKVSVVAESEA 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04404 901 PANTHER DUF2921 FAMILY PROTEIN 3 900 - -
Tsu02g04404 901 Pfam Protein of unknown function (DUF2921) 22 881 IPR021319 -
Tsu02g04404 901 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 3 900 IPR021319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04404 Tsu-Chr2 52831684 52834389 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04404 - - gmx:102664055 1065.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04404 02 52831684 52834389 Tsu02g04404 02 52831684 52834389 ECH