Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04402 ATGATCATGAATTCTCTTCTTCCAAtacttttctttctcttcactttcttctccttcaaccCTTCATTCTCATTAGCCTCAAAACCCTCTTACAAAGACCATTGTGCTTCAATCATCCCAGAAACAACTCCAACAACCAAACTCAAATCCAACTCTTTTCCCTTGAGTGATAAAAATACAGGTGACTACATAGGAGGTGATAGTATCATCAATGTTGATGTATCTTGGAACAAATTCTCCTTATACTTTCCACCAAGAAACACATATGCAACTTCACACCCtaacattttcaaaattgaagGAACTATATCATTCAGAAGCACCATTATTGATTCATATAAGAATAGACATCGTCGTCAAAGAGGTTACTTGACCTTCAAGCTAGATGGTTTTTGGTCTAAATCTTCAGGCAATGTTTGTATGGTTGGAAAAAGTAAAGGTGTTTCTAAAAAAGGTGATTCTCTTAATCTTGATGTTGTTTTTAAGCTTAACAATGTTTTCAATTCAAGTAACGTCACTAGCTTAATTAGTGGAAGCTTAGAGAGTTTGAGTTCTGAAAAGGGTGATGAGAAAAATCATTACTTTGAACCAATTTCTTTAATGATGTTTCCAAAAGCTAATTACAATTATAGTTTGGATTCTAAAGAAGTTGAAAATGAGTTCTCTTTTGATAATGATGGTGATGAGGAAGGTTTATCATTAAACTTTGATTCAATGAGTTTTTGTTCATATCCACTCTCAAGTGCTATTGAAAGACTTCAACTAGAGTACACTGATGAGTGCAATTCTTCAAAGAATTGTACTATAATTAGTGGAAATTCTAGTGATCAATTGGCATCACAAATCTCTTTGAAAGCCATTGGTTGTTCTTTTCATGATAAGAAGCATAGGATTAGAGTTTTGGTTGAATTCTCAAATAGTGTTTATTACTATTGGAATAGACATAACCAAAGCTTTAATACCAAAAGTATGTTAATAGGAGAAGGATGGTGGGATGAGAAGAAAAATATGTTGTGTTTAGTTCTTTGCCATTTCACTGGTACAAGCACAATCACATCTGCATCCTTGGATGAAACTCATGTTGGTGATTGTTCAATAAGATTGAGATTGAGATTCCCTTCAATTTGGTCGATCGAAAACACTAGTAGTGTAGTTGGCCAAATTTGGACTAACAAGAGTGCTAGTGACCAAAACTACTTCAAAATGATAGCATTTAGGAATGATTATGAGAATTTTGGTGTGGGGGGTCAAGACTTAAAGTATGAGTATAGCCAACTTGAAAAAGTTAAACAATCATGTTCGACACAAAAGGTTGTTGAGAACAAGGGGAAAAGCTATCCAGAtgcatattcatattcatatgacATGAGATTCGATATGTCGGTTAGAgagtccaaaaaaaaagtagcttGGGGTTCTTCATCTCCCATATTTGTTGATGACCAGTATCTATCTACATCTGGTTTTTACTCTAGAAGTGAATTTGATGCTGGAATGTTGAACAATAATGATGGTTTGTTTAACATTAGCTACAAGATTAGTCTCAATGTCATCTCTTCTCCGCCTTTTGAAAGGAATTCTTTGTTTAACATGTCTTATTATTCGGTGAAGATTTCGGCAGAAGGAGTTTATGATTCCAGAGATGGAACCTTGTGTATGGTAGGTTGCCGCGACCTTGTCTCAAACAATGAAATggcaacaaccacaacaacaaaacatTCATTGGACTGTGAGATTTTGATGAAATTTCAGTTCCCTTCTTTAGATACAAAGGGTAAGAGCTTCATTAAGGGAAGCATTGAAAGCACGCGCCAAAAATCCGATCCTCTTTACTTCAAACAATTAGAGGTATCCGCGGTAGCGTATTACATCCAAGAAGCAAGAAGAAATGTTTGGAGAATGGATATAGAAGTCATCATGGCTCTGGTATCTACAACTCTAGCATGCATTTTCATCGGATTGCAACTCCGCCATGTGAAAAGAAACCCTAATGTGCTTCCCTTCATCTCAATTTTCATGATGTCAATTCTCACATTAGGTCACATGATACCACTTGTTCTCAATTTTGAAGCACTTCTTGCTAAAGACCCTAACAACACAACCTTTGTTTTAGGAAATGTTGAAAAATGGCTTGAAGTTAATGAAATAAGTGTGAGGCTAATCACCATGGTAGCTTTCTTGTTGCAATTCCGTCTCCTATATCTAACTTGGTCGTCAAGAAAGACAAACGAAAGCGGCAACGACCTCTGGATTGCCGAGAAAAAGGCTTCTTATGTAACTTTCCCCTTGTATGCTGCTGGATTATTGATTGCATTGTTGTTGAAGTTAAAGAAGGATAGAGATTCGGCTACCTCCGCGTACCATGTCTACCGACAACATGATTCGTCTTGGGAGAACATCAAATCTTATGGTGGATTGGTATTGGATGGCTTTCTTGTGCCACAAGTCATTCTaaacttgttttcaaatatgaatgagaatgttctttcattttcattttattttggaactacTTTTGTGAGACTCTTGCCACATGCCTACGATCTTTACCGGACTCATAATTATGCTGACGAAGATAGTAACTCATACTACTATGCTGATCCAAGCCAAGATTTTTACTCAACTTCTTGGGACATTTTCATTCCTTTAGTAGGTATTGTATTTGCTATCATTATCTACTTGCAGCAACGTTGTGGTGGTCGATGTGTTCTGCCTCGGAAATTCAAAGGTTCAAAGGGATATGCAAAGGTGCCTGAATCAGAAGGAGAAGTAGAGGCAACCAAGTTGTAA 2790 0.3452 MIMNSLLPILFFLFTFFSFNPSFSLASKPSYKDHCASIIPETTPTTKLKSNSFPLSDKNTGDYIGGDSIINVDVSWNKFSLYFPPRNTYATSHPNIFKIEGTISFRSTIIDSYKNRHRRQRGYLTFKLDGFWSKSSGNVCMVGKSKGVSKKGDSLNLDVVFKLNNVFNSSNVTSLISGSLESLSSEKGDEKNHYFEPISLMMFPKANYNYSLDSKEVENEFSFDNDGDEEGLSLNFDSMSFCSYPLSSAIERLQLEYTDECNSSKNCTIISGNSSDQLASQISLKAIGCSFHDKKHRIRVLVEFSNSVYYYWNRHNQSFNTKSMLIGEGWWDEKKNMLCLVLCHFTGTSTITSASLDETHVGDCSIRLRLRFPSIWSIENTSSVVGQIWTNKSASDQNYFKMIAFRNDYENFGVGGQDLKYEYSQLEKVKQSCSTQKVVENKGKSYPDAYSYSYDMRFDMSVRESKKKVAWGSSSPIFVDDQYLSTSGFYSRSEFDAGMLNNNDGLFNISYKISLNVISSPPFERNSLFNMSYYSVKISAEGVYDSRDGTLCMVGCRDLVSNNEMATTTTTKHSLDCEILMKFQFPSLDTKGKSFIKGSIESTRQKSDPLYFKQLEVSAVAYYIQEARRNVWRMDIEVIMALVSTTLACIFIGLQLRHVKRNPNVLPFISIFMMSILTLGHMIPLVLNFEALLAKDPNNTTFVLGNVEKWLEVNEISVRLITMVAFLLQFRLLYLTWSSRKTNESGNDLWIAEKKASYVTFPLYAAGLLIALLLKLKKDRDSATSAYHVYRQHDSSWENIKSYGGLVLDGFLVPQVILNLFSNMNENVLSFSFYFGTTFVRLLPHAYDLYRTHNYADEDSNSYYYADPSQDFYSTSWDIFIPLVGIVFAIIIYLQQRCGGRCVLPRKFKGSKGYAKVPESEGEVEATKL 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04402 929 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 1 921 IPR021319 -
Tsu02g04402 929 Pfam Protein of unknown function (DUF2921) 32 904 IPR021319 -
Tsu02g04402 929 PANTHER DUF2921 FAMILY PROTEIN 1 921 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04402 Tsu-Chr2 52809556 52812572 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04402 - - gmx:102660202 1104.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04402 02 52809556 52812572 Tsu02g04402 02 52809556 52812572 ECH