Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04392 ATGACTGGAGTGTCATTGGGTCTACGAACAGGTAGCTATGGTTCTCTGCAGTTGATTCAAAACGGAAACTACTCGCAGGTACCGGTACTTGTTCGTAGACCTTCAAAGACGCTCCTTTATAACCCCAGAGATAAAGAAAGGGGTTGCCTTTATATTTGTCGCCATCTTGGACGTGGCAAGGTTGCTATGCTTCTCATGATTCTTtgtggatttttcatttttgtctttGGTTGCTTTACACTTTACAAAGGTGGAAACATCACTAATGACATTGAAAATAGACGATCTTATGGCATCACCCATGAAACTATAGACATTGAtggaacaataaaaaaaaagttaaaggaTATCAGTATATCTAGACCGCTGACGTTGATAAATAGGCATAAgaattcatataatttaaaaggaaaaaaaggatCTTCCTCTACTGCGGGGCATCCTTGTGATAAATTTGCATTTCCTCCTCCTCCACCTGACAATAAAAGACGTACTGGACCACGACCATGTCCTGTGTGCTATATTCCTGTGGAGCAAGCTATAGCTAGTATGCCAGTTTCCCCATCAGAGTCTCCTGTACTTCGCACTCTCACATATGCGCATAATGAAAATATGTTTCCAAGGGAACCAGAGGGTGGCTCTGATTTTGGTGGATACCCTTCTCTGGAAGAAAGGGATGCTTCTTTTGATATAAAAGAGACCATGAAAGTGCATTGTGGATTTGTCAAAGGAAGCAGACCTGGTCGTCAGACTGGATTTGATTTTGACGAGGAAGATCTCTTAGAGTTGGACCAGTACCATGACATCATTGTTGCATCTGCCATATTTgGAAACTATGATGTATTACAGCAGCCCAGGAACATCAGTAAACAAGCAAAGAAAAATATTCCTTTCTACATGTTCATTGATAAAGAGACAGAAATATATATGAGAAATGCCAGTATTTTGGATAGCAGCAGGAGAATTGGATTGTGGAGAATCATTGTTGTCCGGAATATTCCATATGCTGATTCTAGGCGTAATGGAAAGATTCCTAAACTTCTTTTGCACAGAATCTTCCCCAATATCCGATATTCAATTTGGATTGATGGGAAGCTTGAACTCGTTGCAGATCCATATCTAATTCTTGAAAGGTTCTTGTGGCGCCCAAATGCTACTTTTGCCATTTCGAGACACTATAGACGCTTTGATGTCTTTGTTGAGGCTGAGGCTAATAAAGCAGCTGGAAAATATGAAAATGCTTCCATTGATCGCCAAGTTCAATTTTATCAATACCACGATGGCTTAACTCATTATTCCAGGGCTAAGCTTCCTATAACTAGTGATGTTCCTGAAGGTTGTGTTATCATTAGAGAACACATTCCAATTACAAATTTGTTTACCTGCTTATGGTTCAATGAAGTTGATCGCTTTACTTCAAGGGATCAGTTAAGCTTTTCCACGGTAAGAGACAAAATAATGGCAAAAGTGGATTGGAGTATCAATATGTTTCTGGATTGTGAAAGACGTAACTTTGTGATACAGGCTTACCATAGAGACGTAATGGAGAACAGGCCTCCTCCTTCTCCTCCAGTTGTTGTAATTCGTCGTCCTAATCCACCTGTTTCCTATACTACTCACAAGCCTCCGATGAAGAAGAATCCTAGGCACGGGAGAGGAGATAGGAAATCAGGGTCTAGGCGTCATCGTAAAGTAGTAGACAATGTTGTTAtgaaccaaattttattttag 1731 0.3859 MTGVSLGLRTGSYGSLQLIQNGNYSQVPVLVRRPSKTLLYNPRDKERGCLYICRHLGRGKVAMLLMILCGFFIFVFGCFTLYKGGNITNDIENRRSYGITHETIDIDGTIKKKLKDISISRPLTLINRHKNSYNLKGKKGSSSTAGHPCDKFAFPPPPPDNKRRTGPRPCPVCYIPVEQAIASMPVSPSESPVLRTLTYAHNENMFPREPEGGSDFGGYPSLEERDASFDIKETMKVHCGFVKGSRPGRQTGFDFDEEDLLELDQYHDIIVASAIFGNYDVLQQPRNISKQAKKNIPFYMFIDKETEIYMRNASILDSSRRIGLWRIIVVRNIPYADSRRNGKIPKLLLHRIFPNIRYSIWIDGKLELVADPYLILERFLWRPNATFAISRHYRRFDVFVEAEANKAAGKYENASIDRQVQFYQYHDGLTHYSRAKLPITSDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFSTVRDKIMAKVDWSINMFLDCERRNFVIQAYHRDVMENRPPPSPPVVVIRRPNPPVSYTTHKPPMKKNPRHGRGDRKSGSRRHRKVVDNVVMNQILF 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04392 576 MobiDBLite consensus disorder prediction 151 165 - -
Tsu02g04392 576 PANTHER DUF616 FAMILY PROTEIN 1 570 - -
Tsu02g04392 576 PANTHER ALKALINE CERAMIDASE-RELATED 1 570 IPR006852 -
Tsu02g04392 576 MobiDBLite consensus disorder prediction 521 564 - -
Tsu02g04392 576 MobiDBLite consensus disorder prediction 136 165 - -
Tsu02g04392 576 MobiDBLite consensus disorder prediction 543 559 - -
Tsu02g04392 576 Pfam Protein of unknown function (DUF616) 197 511 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04392 Tsu-Chr2 52632919 52638196 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04392 - - gmx:100810918 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04392 02 52632919 52638196 Tsu02g04392 02 52632919 52638196 ECH