Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04387 atgaagatgatgatgggAATCTtaaacttagaaaaaaaatggatattACCTCTTTTTGTTACTTCTGCTTTTTGTATGCTTTTTCTAGCAACAACCTTTAACATGGGACTTGTTTCATCAATTCATTCAATCAAttcacttttcttttttctaccATCACACACACATAGAAACCAAACATCTTCACTTGCTTTTGTCGAGAGAAAGGTTTCGCCTGTTCCGCCTCCTGATAAGCCTCCTAATTCGACCCCTCGTTTCGCTTATTTGATTTCGGGTTCTAAAGGCGATTTGGAAAAGCTATGGCGAACACTTCATGCACTTTACCATCCGTTAAATCATTATGTTGTTCATTTAGACCTTGAGTCGCCGTTGGAGGAACGGTTAGAACTTGCTTCGAGGATCGAAAAACAGCATATTTTTAAAGAGGTTGGGAATGTTTATGTTATCCCGAAGTCTAATATGGTTACTTATCGTGGACCGACGATGGTTGCTAATACGCTACATGCTTGTGCTATTTTGCTTAAGAGAAGTAAAGATTGGGATTGGTTTATTAATCTTAGTGCTTCCGATTATCCTCTTGTTACTCAAGATGATCTGTTATATGCTTTCACAAATTTAGATAGAAACCTTAACTTCATCGAGCACACAAGTCGGTTAGGATGGAAGCTGGAGAAACGAGCGATGCCGTTAATAATCGATCCAGGACTTTATCAGTCAACCAAGCAGGATGTATTTTGGGCCAATCCTAAGAGACCTTTGCCAACTGCGTTTAAATTATTCACCGGTTCAGCATGGATGGTTTTATCACATGAGTTTGTCGAATTTGTTGTTTGGGGTTGGGATAATCTACCAAGAACCCTACTCATGTACTACACAAATTTTCTCTCTTCCCCCGAAGGCTACTTTCAAACCGTCGCGTGCAATGTTCCCGAATTATCTAAAACCATTGTTAACAGTGACTTGCATTATATTTCATGGGACATCCCACCTAAACAACACCCTCACGTCCTTAACATAAACGACACAGACAAAATGATTGCGAGTGGTGCCGCCTTCGCTAGAAAATTCAATCAAGACGATTCCGCCATGGATTTGATTGATAAAAAGTTTCTTCGTAAGAGACATGGACTATTCACTTTTGGTGGTTGGTGTTCCGGTAAACCAAAATGTACCGAGGTTGGTAACATGTATAAACTCAAACCCGGTCCGGGGGCTCAAAGGCTTCAACAACTTCTATCTGGACTAGTATCAAAAGCTAAATCTGGTGAGGATCAGTGTACATAG 1284 0.3863 MKMMMGILNLEKKWILPLFVTSAFCMLFLATTFNMGLVSSIHSINSLFFFLPSHTHRNQTSSLAFVERKVSPVPPPDKPPNSTPRFAYLISGSKGDLEKLWRTLHALYHPLNHYVVHLDLESPLEERLELASRIEKQHIFKEVGNVYVIPKSNMVTYRGPTMVANTLHACAILLKRSKDWDWFINLSASDYPLVTQDDLLYAFTNLDRNLNFIEHTSRLGWKLEKRAMPLIIDPGLYQSTKQDVFWANPKRPLPTAFKLFTGSAWMVLSHEFVEFVVWGWDNLPRTLLMYYTNFLSSPEGYFQTVACNVPELSKTIVNSDLHYISWDIPPKQHPHVLNINDTDKMIASGAAFARKFNQDDSAMDLIDKKFLRKRHGLFTFGGWCSGKPKCTEVGNMYKLKPGPGAQRLQQLLSGLVSKAKSGEDQCT 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04387 427 Pfam Core-2/I-Branching enzyme 86 345 IPR003406 GO:0016020|GO:0016757
Tsu02g04387 427 PANTHER OS01G0201100 PROTEIN 8 426 - -
Tsu02g04387 427 PANTHER GLYCOSYLTRANSFERASE 8 426 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04387 Tsu-Chr2 52578635 52582280 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04387 5 426 Glycosyltransferase AT3G15350 66.589 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04387 - - gmx:100776045 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04387 02 52578635 52582280 Tsu02g04387 02 52578635 52582280 ECH