Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04386 ATGAAAGAGATTGAGCCTCTGCAGCAGGCACTGGGAAAGCTGCGTAATACGAATAATGCAGGTCGCGGAGGTATATGCTCATCTGAGGAGGAACTTAATGATGTGATATATAGCTTGCAATACCGCATTCAGCATGAGAGCATTCCATTGACTGAGGAAAAGCAAATCCTCCGTGAAATTAAACAGCTTGAAGGGACAAGGGAGAAAGTTATTGCTAATGCTGCAATGAGGACCAAGTTACAGGATACTGTGGGGCAGAAAAATGACATCCAAGACCAGGTTAAGCTTATAGGTGGGGATTTGGATGGAGTGAAGAAGGAAAGACAGGCGATTCGGGCCAAAATCAAGCAAATTGATGATGCGCTGAAAACCAACGAAACTGATATCCAGACTCTACAGGAAGAACTGGAAGCTGTTACTAAGAAGAGGGAACAAGCTTTTGAGAGCATTCAGAAGCTGAGGAAACAGCGTGATGAAGGGaaTTCTCATTTCTACCAAAGTCGTGTAATCCTGACTAAGGCACGTGATCTGGCTGCTAAGAAGGATGTTAAGGCTCTTGATGAACTTACACATGCAGAGGGTGAGAAATTCATGTCACATTGGAAAGGTGGCAAAGCATTTAGGGATGATTATGAGAAAAGAATTTTGTCATCATTGGATGTGCGTCAGATGAGTAGGGATGGGCGTATTAGGAACCCTGATGAAAAGCCATTGCTGGCAGAACCGAAACCTGCTGAATCTGAGCCATTACCAAAAGCCATCGCAAAACAGCCAAAGGAGGAGCCTAAGCCTTCTCCAGCGGAAACTCAGAAAGAAACCAAAACCAAAGGGAGGGATTTGAAAACTAAGTCCGATAATAAGGATTCAACAACAActgatgatgattatgaattTGAAAATCCTCATAAGGATACCGCTGCTGTGAAAGAGCCTGAAATCGATCCAGCAAAGCTGAAAGAGATTAAAAGAGAAGAGGAAATTGCTAAAGCAAAACTGGCTgcagaaaggaagaagaagttgGCAGAGAAAGCTGCAGCCAAAGCAGCTCTCAAAGCACAAAAGGAAGCTGAGAAGAAACTTAAgGACCGTGAGAAGAAAGCAAAGAAGAAATCAGGAGCTGGTACCAATCCCCAGGAGGAACAGGAAGCTGCAGAAGCCGAGGCAACCGAACCAGAAAAGGTTAATGATGTTGTTGAGGCCCCGGCTCCAGTGAAGGAAAAGGTCACAAAGGAGAGCACTGTCAGGTCCCGAAGCCGAGGAAAGGTTCCAGAGCCAATTCCAAAAGCAATTCTGAAGCGGAAAAAGTCCAACAATTACTGGATATGGATCGCTGTTGCTGCTTTGTTAGTCCTGCTGCTGTCGGTGCTTGGATACACCTATCTTCTCTAG 1389 0.437 MKEIEPLQQALGKLRNTNNAGRGGICSSEEELNDVIYSLQYRIQHESIPLTEEKQILREIKQLEGTREKVIANAAMRTKLQDTVGQKNDIQDQVKLIGGDLDGVKKERQAIRAKIKQIDDALKTNETDIQTLQEELEAVTKKREQAFESIQKLRKQRDEGNSHFYQSRVILTKARDLAAKKDVKALDELTHAEGEKFMSHWKGGKAFRDDYEKRILSSLDVRQMSRDGRIRNPDEKPLLAEPKPAESEPLPKAIAKQPKEEPKPSPAETQKETKTKGRDLKTKSDNKDSTTTDDDYEFENPHKDTAAVKEPEIDPAKLKEIKREEEIAKAKLAAERKKKLAEKAAAKAALKAQKEAEKKLKDREKKAKKKSGAGTNPQEEQEAAEAEATEPEKVNDVVEAPAPVKEKVTKESTVRSRSRGKVPEPIPKAILKRKKSNNYWIWIAVAALLVLLLSVLGYTYLL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04386 462 MobiDBLite consensus disorder prediction 387 421 - -
Tsu02g04386 462 MobiDBLite consensus disorder prediction 253 375 - -
Tsu02g04386 462 MobiDBLite consensus disorder prediction 226 421 - -
Tsu02g04386 462 Coils Coil 101 156 - -
Tsu02g04386 462 PANTHER PROTON PUMP-INTERACTOR 1-LIKE 2 461 - -
Tsu02g04386 462 Coils Coil 343 370 - -
Tsu02g04386 462 MobiDBLite consensus disorder prediction 226 242 - -
Tsu02g04386 462 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 2 461 - -
Tsu02g04386 462 Coils Coil 318 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04386 Tsu-Chr2 52553426 52557391 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04386 - - mtr:MTR_2g085330 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04386 02 52553426 52557391 Tsu02g04386 02 52553426 52557391 ECH