Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04381 aTGGCAGCAGCGATTCCTCTGAACGGAGTAAAGCTAGGGACATCGTCCTCTCAGGCGTATCTAGAAGGGAAAGCAGTGAAGGAAACCAAAGCTCTCATGGCGGAACTGTGTCGCCACTTCTACACTTTAGGATGGGTATCTGGAACTGGTGGCAGTATCAGCATCAAAGTTCACGATGATTCCATTCCTAAACCTCAACAACTCATTCTCATGTCCCCTTCTGCTGTtcagaaagaaagaatggaacCAGAGGATATGTATGTGTTATCCGACAATGGGTCAGTTTTGTCTGCCCCATCTCCCAAACCTTACCCACATAAGCCTCCTAAGTGTACTGATTGTGATTCACTCTTCATGAAGGCATATGAAAAGCGTGATGCTGGTGCTGTTATCCATAGTCATGGGATGGAATCTTGTCTTGTAACAATGATCAATCCTTTTTCAAAGGAATTTCGAATTACTCACATGGAGATGATAAAAGGGATCAAGGGGCATGGTTATTATGATGAACTAGTGGTCCCCATAATTGATAACACAGCCCATGAACATCAACTCACAGAATCTTTTGCTAAAGCAATTGAAGACTACCCTAAAACAACAGCAGTGCTTGTTCGCAACCATGGGATATTTGTTTGGGGAGACTCATGGATCAGTGCTAAAACTCAGTCTGAATGTTACCATTACCTTTTTGATGCTGCTATCAAACTTCATCAAGTGGGATTGGACTGGTCGACTCCAAATCATGGTCCGATACTAAGTGCACGAAGGGGTTTAAGTATTGCCGGGGAGTCAAATCTGTCAACAAAGGCAAGGAAGGATAATGGTGATATTGATCCATCTCCACGTTGCATTGTTCTTGACATTGAAGGAACTACTACTCCCATATCATTTGTTTCAGAGGTTCTCTTCCCATATGCCCGTGATAATGTTGGGAGGCATCTTTCTGCAACATATGATACCTCTGAAACTAAAGCCGATATCAAGTTGCTTCGCTCCCAAGTTGAGAGTGACCTTGAACAAGGGATTGCAGGTGCTGTGCCTATCCCCCCAGATGATGCTGGGAAAGAAGAAGTTATTGCTGCTATAGTTGCTAATGTGGATGCTATGATCAAAGCAGATAGAAAGATTACTGCCTTAAAAGAGTTGCAGGGTCATATATGGCAAACTGGTTATGCGAATAATGAATTGGAGGGAATAGTCTTTGATGATGTACCCGAGGCTTTAGAAAAGTGGAATGCATTGGGCATAAAGGTGTACATATATTCTAGTGGTAGCAGGTTGGCGCAAAGGCTAATATTTGGAAAAACAAACTATGGGGACCTAAGAAAATTTCTATCTGGGTTTTTTGACACCACAGTGGGGAACAAGAAAGAGACACGAAGTTATGTTGAAATCTCTCAGTCACTTGGTGTAGATAAGCCATCAGATATTTTATTTGTCACTGATGTATACCAAGAAGCTACAGCTGCAAAGGCAGCAGGTTTGGAAGTGATAATTTCGATTCGACCTGGAAATGGACCTCTCCCTGGTCATCATGGGTTCAAGACAGTCAAATCCTTTTCAGAGATCTAA 1572 0.4211 MAAAIPLNGVKLGTSSSQAYLEGKAVKETKALMAELCRHFYTLGWVSGTGGSISIKVHDDSIPKPQQLILMSPSAVQKERMEPEDMYVLSDNGSVLSAPSPKPYPHKPPKCTDCDSLFMKAYEKRDAGAVIHSHGMESCLVTMINPFSKEFRITHMEMIKGIKGHGYYDELVVPIIDNTAHEHQLTESFAKAIEDYPKTTAVLVRNHGIFVWGDSWISAKTQSECYHYLFDAAIKLHQVGLDWSTPNHGPILSARRGLSIAGESNLSTKARKDNGDIDPSPRCIVLDIEGTTTPISFVSEVLFPYARDNVGRHLSATYDTSETKADIKLLRSQVESDLEQGIAGAVPIPPDDAGKEEVIAAIVANVDAMIKADRKITALKELQGHIWQTGYANNELEGIVFDDVPEALEKWNALGIKVYIYSSGSRLAQRLIFGKTNYGDLRKFLSGFFDTTVGNKKETRSYVEISQSLGVDKPSDILFVTDVYQEATAAKAAGLEVIISIRPGNGPLPGHHGFKTVKSFSEI 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04381 523 SMART Aldolase_II_2 31 234 IPR001303 -
Tsu02g04381 523 Hamap Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1. 18 523 IPR027505 -
Tsu02g04381 523 Hamap Enolase-phosphatase E1 [mtnC]. 280 523 IPR023943 GO:0000287|GO:0019509|GO:0043874
Tsu02g04381 523 SFLD Haloacid Dehalogenase 282 522 - -
Tsu02g04381 523 SUPERFAMILY HAD-like 281 523 IPR036412 -
Tsu02g04381 523 Gene3D - 26 250 IPR036409 -
Tsu02g04381 523 TIGRFAM salvage_mtnB: methylthioribulose-1-phosphate dehydratase 33 238 IPR017714 GO:0005737|GO:0019509|GO:0046872
Tsu02g04381 523 SFLD enolase-phosphatase 282 522 IPR023943 GO:0000287|GO:0019509|GO:0043874
Tsu02g04381 523 CDD HAD_EP 283 504 IPR023943 GO:0000287|GO:0019509|GO:0043874
Tsu02g04381 523 TIGRFAM enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 282 521 IPR023943 GO:0000287|GO:0019509|GO:0043874
Tsu02g04381 523 Hamap Methylthioribulose-1-phosphate dehydratase [APIP]. 18 242 IPR027514 GO:0005737|GO:0019509|GO:0046872
Tsu02g04381 523 PANTHER BIFUNCTIONAL METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE/ENOLASE-PHOSPHATASE E1-RELATED 2 523 - -
Tsu02g04381 523 SUPERFAMILY AraD/HMP-PK domain-like 27 247 IPR036409 -
Tsu02g04381 523 Pfam Class II Aldolase and Adducin N-terminal domain 32 233 IPR001303 -
Tsu02g04381 523 Gene3D - 390 523 IPR023214 -
Tsu02g04381 523 Gene3D - 295 389 - -
Tsu02g04381 523 Pfam haloacid dehalogenase-like hydrolase 282 494 - -
Tsu02g04381 523 PANTHER METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE 2 523 IPR017714 GO:0005737|GO:0019509|GO:0046872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04381 K16054 - gmx:100796209 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04381 02 52493578 52502430 Tsu02g04381 02 52493578 52502430 ECH