Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04370 ATGGCTGCAAGTATCATTTCAGATGGAACAGAAACACCTCTGTTACTACCAATTGATGAGAATGGAACACAGAACACAAGACCTGAGAAATGGTGGAACAAAGTATTGGACATAGAGGAAGCAAAACGTCAACTTATGTTTTCATTACCAATGATTCTTACAAActtgttttattatttgatcACTTTGGTTTCTGTGATGCTTGTTGGTCATCTTGGTGAGCTTCAGTTAGCTGGTTCTACTCTTGCTAATTCTTGGTTTAGTCTCACTGGTGTGGCTGTTATgGTTGGTTTAAGTGGTGCACTAGAAACACTCTGTGGGCAAGGATTTGGTGCAAATGAATATCACATGTTGGGAATTTATCTACAAGGCTCATGCATCAtatctttcattttttctatcaTTATATCAATTATTTGGTTCTATACAGAACACATTCTAGTGTTATTTCATCAATCACAAGACATTGCTAGAACAGCTGCACTCTATATGAAGTTTCTCATACCAGGATTATTTGCATATAGCATCTTGCAAAACTTGTTGAGGTTTTTACAGACACAATCTATAGTGATGCCATTGGTTATTCTTTCAGCTATTCCAGCATTGGTTCATGTTGGAATTGCATATGGATTTGTTGAATGGACAAGTTTGAATTTCATAGGTGGACCAATTGCAACTTCTATTTCATTGTGGATTTCAATGATAATGTTAGGATTATACATCATTTTTGCAAAGAAGTTTGAGAATACATGGAGAGGATTTTCAATGCAATCATTTCATTACCTATTTACAAACTTGAAACTAGCTCTACCCTCAGCAGCAATGGTATGTTTGGAATATTGGGCTTTtgaagttttggttttcttagcTGGAATAATGCCTGATTCACAAATAACAACTTCATTGATTGCAATATGTGCAAACACAGAATTCATTGCTTACATGATCACTTATGGTCTTAGTGCTGCTGCAAGCACAAGGGTTTCCAATGAATTGGGAGCAGGCCAACCAGAAAAAGCTAAACATGCAATGGCAGTCACTCTAAAGCTCTCTCTCCTtcttggtttttgttttgttttgatgctTTTATTTGGTCATGATATATGGATTCAGCTGTTTAGTAATAGTCCTATTATCCAAAAGGAGTTTGCTTCAATAACACCATTGCTTGCTATTTCCATACTATTAGATTCTGTCCAAGGTGTCTTATCAGGGGTAGCTAGAGGATGTGGTTGGCAGCACTTAGCTGTTTATGTCAACCTTGCAACTTTTTATCTTATTGGTTTACCTATTTCATGTCTCCTTGGATTTAAGACCAACTTACAATATAAGGGTTTATGGATTGGTGTGATTTGTGGCTTGGTGTGTCAAACTGGGACACTCTTACTTTTGACAAGATATGTCAAATGGACTAAACTGAATGTTTCAGAGGACAAAGATAAAGGCCAACTCATTGTTGCTTAA 1464 0.3477 MAASIISDGTETPLLLPIDENGTQNTRPEKWWNKVLDIEEAKRQLMFSLPMILTNLFYYLITLVSVMLVGHLGELQLAGSTLANSWFSLTGVAVMVGLSGALETLCGQGFGANEYHMLGIYLQGSCIISFIFSIIISIIWFYTEHILVLFHQSQDIARTAALYMKFLIPGLFAYSILQNLLRFLQTQSIVMPLVILSAIPALVHVGIAYGFVEWTSLNFIGGPIATSISLWISMIMLGLYIIFAKKFENTWRGFSMQSFHYLFTNLKLALPSAAMVCLEYWAFEVLVFLAGIMPDSQITTSLIAICANTEFIAYMITYGLSAAASTRVSNELGAGQPEKAKHAMAVTLKLSLLLGFCFVLMLLFGHDIWIQLFSNSPIIQKEFASITPLLAISILLDSVQGVLSGVARGCGWQHLAVYVNLATFYLIGLPISCLLGFKTNLQYKGLWIGVICGLVCQTGTLLLLTRYVKWTKLNVSEDKDKGQLIVA 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04370 487 PANTHER PROTEIN DETOXIFICATION 21 481 - -
Tsu02g04370 487 PANTHER MULTIDRUG RESISTANCE PROTEIN 21 481 - -
Tsu02g04370 487 TIGRFAM matE: MATE efflux family protein 50 447 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu02g04370 487 CDD MATE_eukaryotic 40 472 IPR045069 GO:0042910|GO:1990961
Tsu02g04370 487 Pfam MatE 50 209 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu02g04370 487 Pfam MatE 271 432 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04370 Tsu-Chr2 52371126 52375787 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04370 K03327 - gmx:100816310 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04370 02 52371126 52375787 Tsu02g04370 02 52371126 52375787 ECH