Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04346 ATGGCTTCCGGTCGGATAAAGAACTTAACTTCCACCTTCGGCTCCGATATTCAACCTGTTATTTCGGAAATCCGAACAACAGTGGGTGTGATGAAGGATATTGCAGTTCAATTGGAAAAAGACAATCTTCCAGACAAGGTGAAGGAGATGGAAGATGCTGTTATTGAGTTAGTTGGCTTATCTGAACACAGTGTGCATTTTTCATCTGCTGTTCAAGCTTTTGGTAATAGATACCAGCCTGGAGAACAGTTGACTGATTTTCATAAGGTGTTGGAAGATGAAGTTTTGCAGTTTAGGGCCAATCAAAATTCAGATATTCAAAGAAATCCTTTAGTGCGCCAATTTAAGGAAGCTGTATGGAAAGTGCATCACAGTGGACAGCCAATGCCAGGTGAAGAGGAGGAAGACATTGTAATGACTAGTACCCAAactaatattttgaattttagttGTCCAGTGAGTGGGAAGCCTATTACTGAGCTTGAAGAACCAGTTCGCAGCATGCAATGCAGGCACATTTATGAAAAGAAAGCAATAATGCAATATATCAAGTCAAAGAGCAACCGTTCTCAATGTCCAATATCGGGTTGTCCAAAAACATTGGATGTAAATATGCTGGTACAGGATCCGTCGTTGGCTGTGGATATTGATGAAATGCGAAATATGAACAGCAAAGAAACTGATGTAGAAGATTTCACCATGCTTGATGAAGATTAA 717 0.3947 MASGRIKNLTSTFGSDIQPVISEIRTTVGVMKDIAVQLEKDNLPDKVKEMEDAVIELVGLSEHSVHFSSAVQAFGNRYQPGEQLTDFHKVLEDEVLQFRANQNSDIQRNPLVRQFKEAVWKVHHSGQPMPGEEEEDIVMTSTQTNILNFSCPVSGKPITELEEPVRSMQCRHIYEKKAIMQYIKSKSNRSQCPISGCPKTLDVNMLVQDPSLAVDIDEMRNMNSKETDVEDFTMLDED 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04346 238 CDD SPL-RING_NSE2 149 218 IPR004181 GO:0008270
Tsu02g04346 238 Pfam Zinc-finger of the MIZ type in Nse subunit 135 197 IPR004181 GO:0008270
Tsu02g04346 238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 232 IPR013083 -
Tsu02g04346 238 SUPERFAMILY RING/U-box 149 202 - -
Tsu02g04346 238 PANTHER UNCHARACTERIZED 3 226 IPR026846 GO:0000724|GO:0019789|GO:0030915
Tsu02g04346 238 ProSiteProfiles Zinc finger SP-RING-type profile. 133 227 IPR004181 GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04346 K22756 - gmx:100804379 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04346 02 52037678 52043317 Tsu02g04346 02 52037678 52043317 ECH