Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04342 ATGGAAACAGAAAAACATCATCGTACAACAAATAACAACAGTAGCAAAAGTGAACTCTTTGTTTGTTTCACATCACGtttatcatcttcatcaatgAAACTCTCATCAAAATCAATCTTAAGTCCAAGCCGTAGTAGAGACCAACCACAGATatcactttcatcttctttaaGCAGAAGATTAAAGAGTAATGGTAGCATGAAAGGTGGTCAAGCTTCACCTATGTTTCCAACTGGTGGAAAGAAAAGAGGATGTGGTTTTGAGAATCCAGAACCTTCATCTCCTAAAGTAACTTGCATTGGACAAGTTAGAGTTAAGACAAAGAAACAAGGGAAGAAAATGAGGTCAAGATCAAAGAGAAGAGGTGAAGCTAGTTTTAGAAGAGGTGAAAATAATCCAGATCTAACTAGACAGAATAGTCAAAGTTTGTATCAGAATCATCAAAATTTGCAACAAGAATGTTTGAAACATAGGAATCAAAGATGGGTTCATTTGCCTTTAACAATATGTGAAGCTTTAAGAGAGTTTAGTTGTTTTTTTCCTTGTAGGTCTTCTTGTATGTCaaatgaaagagagaaagatgaaaaggGTAGTAGTAGtttagaaagagaaagagaaagatcTGGTGGTGGACATGGTAGAGAAGGTTCATGTGGAGCTGCATTTGCAAGATGGTTAGTTGCTTATGATGGTAAAGGGAGAGAGATTGAGGTTATGATGGAACATCATGAGGAGATGGAGATGGAGATGGAAATGGATGATGAGGATGTTGGTGATGATGGAAGAGAGAAAGGTGAAAGGAGTTATAGTCAAAGGAGACATATTTTTGAAGATCTTGATATTGATTTGGTTGATGAGAAGATTCAACAAGAAGAGTTTCaaggtgaagaagaagaagttgaagaGAAAGGTAGAGTTAGCATTTGTGTTCCACCAAAGAATGCTCTTTTGTTGATGAGGTGTAGATCTGATCCTGTCAAAATGGCTGCTTTGGCTAATCGTTTTTGGGAATCACCTATTCAcaaagaacaagaacaagatcatcaacaacaacaacgagAACATCACAATGAAGTTCAAGAACTAGAAGAATCtagtgaagatgaagatgatgaacaagaacaagaacaacaagAAGAACAAGGTTACTATAAAGGAGAAAACATTGAAATGGaacaagttgaagaagaagaaccacAACAATTGGTTGAAGTAGTGGAAACAATGTTACAAGAAGAAGATAGCATTTGTGAAATTGAAAGCAAAAGAGACCAAGAAGTTGATGAAGAAATAACCAAGGAAgaggaagagaaaaatgaagatGACATTGATGAAGATAAAGATGAAACCTTTACATGTGTTTTACTTGATTCATCTCATGCAGATCttgaaaaacaagaaatagAAGAAATCCATCAAGAAGAACATGAAgagaaacaagaaaacaaagaaagttCAGAactttcttcttattcttcttcatcttcttctactTCACCTGAAACATTCTTAGCTTCTTCAGAACAAGAAACAGAACCAGAAAATGCAGAAAAAGTTTCAGtggaggaggaagaagagaaagtGACTGGTGCAGAGAAGGAAGAGGATCCGATCCAACAAAGATCCGACCCAGAAATTGGTCTTATCGGGTCAACGGAGCGAGAAAATGGgtcaaagaaagaagagagaggaAGAGAAACATTACCAGAATGCTTGTTATTGATGATGTGTGAGCCAAAGCTATCAATGGAAGTGTCAAAAGAAACATGGGTATGTAGCACTGATTTTATACGGTGGTTACCGGAGAGACCCGTCGGAAAAGTCGCCGGAGGGGAGAAAAAGGTTACAGTGGAGTCATCATCTTCTTCGTCGTGTACTAAGCCGAAGGTGAAAGTGAAAGCTGTTCAGCCGTTGATGCAGCCGCCAAGATCTTCGTGTTCTTTTCCGGTGACCGGAAATGGCGCTGGAATGTCAATGGCGACATTGATTGAGCAGAAGTTGGTGGGTTGTTCGAAATCTCGTAATGGGTATGAGCCGTTTGTTCTGAAGCGATGTAAGTCGGAGCCAATGAGGTCGGCGACTAAGCTTGCACCGGAGGCTTGTTTCTGGAACAATCGGAAACTTGAGCCTCCGGCTTCGCTTGGCGTCGGCGCGCCGGCTGGTGTtgggttttga 2175 0.337 METEKHHRTTNNNSSKSELFVCFTSRLSSSSMKLSSKSILSPSRSRDQPQISLSSSLSRRLKSNGSMKGGQASPMFPTGGKKRGCGFENPEPSSPKVTCIGQVRVKTKKQGKKMRSRSKRRGEASFRRGENNPDLTRQNSQSLYQNHQNLQQECLKHRNQRWVHLPLTICEALREFSCFFPCRSSCMSNEREKDEKGSSSLERERERSGGGHGREGSCGAAFARWLVAYDGKGREIEVMMEHHEEMEMEMEMDDEDVGDDGREKGERSYSQRRHIFEDLDIDLVDEKIQQEEFQGEEEEVEEKGRVSICVPPKNALLLMRCRSDPVKMAALANRFWESPIHKEQEQDHQQQQREHHNEVQELEESSEDEDDEQEQEQQEEQGYYKGENIEMEQVEEEEPQQLVEVVETMLQEEDSICEIESKRDQEVDEEITKEEEEKNEDDIDEDKDETFTCVLLDSSHADLEKQEIEEIHQEEHEEKQENKESSELSSYSSSSSSTSPETFLASSEQETEPENAEKVSVEEEEEKVTGAEKEEDPIQQRSDPEIGLIGSTERENGSKKEERGRETLPECLLLMMCEPKLSMEVSKETWVCSTDFIRWLPERPVGKVAGGEKKVTVESSSSSSCTKPKVKVKAVQPLMQPPRSSCSFPVTGNGAGMSMATLIEQKLVGCSKSRNGYEPFVLKRCKSEPMRSATKLAPEACFWNNRKLEPPASLGVGAPAGVGF 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04342 724 MobiDBLite consensus disorder prediction 341 362 - -
Tsu02g04342 724 MobiDBLite consensus disorder prediction 28 71 - -
Tsu02g04342 724 MobiDBLite consensus disorder prediction 415 429 - -
Tsu02g04342 724 MobiDBLite consensus disorder prediction 189 212 - -
Tsu02g04342 724 MobiDBLite consensus disorder prediction 363 377 - -
Tsu02g04342 724 MobiDBLite consensus disorder prediction 460 485 - -
Tsu02g04342 724 PANTHER CHLOROPLAST PROTEIN HCF243 1 724 - -
Tsu02g04342 724 MobiDBLite consensus disorder prediction 486 510 - -
Tsu02g04342 724 Coils Coil 461 481 - -
Tsu02g04342 724 MobiDBLite consensus disorder prediction 28 139 - -
Tsu02g04342 724 MobiDBLite consensus disorder prediction 511 541 - -
Tsu02g04342 724 MobiDBLite consensus disorder prediction 189 216 - -
Tsu02g04342 724 MobiDBLite consensus disorder prediction 341 565 - -
Tsu02g04342 724 PANTHER CHLOROPLAST PROTEIN HCF243-RELATED 1 724 - -
Tsu02g04342 724 MobiDBLite consensus disorder prediction 106 122 - -
Tsu02g04342 724 MobiDBLite consensus disorder prediction 430 448 - -
Tsu02g04342 724 Coils Coil 341 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04342 Tsu-Chr2 52004416 52006932 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04342 - - cam:101508279 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04342 02 52004416 52006932 Tsu02g04342 02 52004416 52006932 ECH