Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04336 ATGGTCTCAATAGAAATCGATCACAATAACAACGATGGTGGCGCCATACCGAAGAAATCGACCCCCGGTAGCAAGAGAAAGGCGGCAGCAGCGGCATACAAGCACGACGATACTAGCCAGCTGTCGGcgaggaagaagaaagagatgAGAATTCGTTTATCGTTAACAAGACCTTCATATGTTCTTGGACTTTGTACTAAATCTCTTAGAGCGGAACATCGTAAGAGATTGCATTACTTGGTTCGCAAGCTTGTTAATCGACATGATTGGGTTGGAGCTAGTGGTGTTATGAGTGTTTACTTGAAAGGAACTGTTAATGATACTTCTCCTTTGAAGAACCGTTTTAAGTTTTGGgTTTTACTGGAGCTTCTTAAGCATTTAGAAAACCATTCCATGAATTCAACAAGGATCAGGAATCTCTATGACATTTGGGCAAAGAAGATTGGATCAATGAAGACCTGGCCATTAGAgAGCAGATATGCAGTTCAATTGGAGTTCATGTTGTTCTATCTTATGCAAGGCAATGTTGTGGGTGCATATCAGCTTGCTCTAGTCCTTGAGCAAGAAAAAGTTGATATTGATCCTGTTTCGAAGATGATGATGGGTTTGACATTCTATGAGCTGTGGTATTCTTCTTCTATTCCTGATGAGTTTAAGTGGAGAGATTTAGATCAAATTGAAGGTCAAGAGAACTCACATACCGAGGGAACCTCATTCAGCAACAATGTTGGACAGTCAGAATGGCATAATTCAGTTCAGTCGCACATGGCAGACTCCCAATATCAATGTAACTCAGATTCATCTGTCATGAATAATAGACAAATTTCTAAGGAGATTGGCTTCAATAAAGATATGATTGTTGCCATGGATGTTGATGCTAAccataaaagagaaaaatcacATCATATCATTCAGCCAGAAAGTTTTTACATGATTTCTGATGAAAGCCAAGGAATAGGAGACCCTTCTTCTAATATTCGAGTTTTTACACAACATGACTTGTACGCTCTTGGAAGAGTTGATTTGTGGTTGCCCTTGCGTTTTTCGGATGGGAACAATTTGGTGGAGATCAAGGTTAATAACTACTACAACGATGCAGTGAAGTATTTACATCAAGCTCTGGACTCAACATCTGCTGCATCAGCATTATCCGTTGCATCAGCAGCATTACTTCCATTAGTACAGCTGTTGCTGATTGGAGGTCAAGTTGATGATGCTATAACTTTGCTTGAGAACCAGTGCAATAGTTCACACTCTGTACTCCCAATTAGATTACGAGTTGCTCTATTGGAGCATTTTGATCGAAACAACTCTCTCTTACTTTCAAGTTGTTATGAGGATATTCTAAAGAAGGATCCAACATGTCGTGATTCTATAGCAAAACTTATAAGGATGCACCAAATAGGGGAATATAGTCTTGAATCTCTTCTTGAAAATATTGCTTTACATTTAGATGCTACAGATGCAGAGTACAATACATGGAAGAGGGTATATCAGCAAAATCTTGGAATCTTCGTTGTCGGTGGTGGCTAA 1533 0.3842 MVSIEIDHNNNDGGAIPKKSTPGSKRKAAAAAYKHDDTSQLSARKKKEMRIRLSLTRPSYVLGLCTKSLRAEHRKRLHYLVRKLVNRHDWVGASGVMSVYLKGTVNDTSPLKNRFKFWVLLELLKHLENHSMNSTRIRNLYDIWAKKIGSMKTWPLESRYAVQLEFMLFYLMQGNVVGAYQLALVLEQEKVDIDPVSKMMMGLTFYELWYSSSIPDEFKWRDLDQIEGQENSHTEGTSFSNNVGQSEWHNSVQSHMADSQYQCNSDSSVMNNRQISKEIGFNKDMIVAMDVDANHKREKSHHIIQPESFYMISDESQGIGDPSSNIRVFTQHDLYALGRVDLWLPLRFSDGNNLVEIKVNNYYNDAVKYLHQALDSTSAASALSVASAALLPLVQLLLIGGQVDDAITLLENQCNSSHSVLPIRLRVALLEHFDRNNSLLLSSCYEDILKKDPTCRDSIAKLIRMHQIGEYSLESLLENIALHLDATDAEYNTWKRVYQQNLGIFVVGGG 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04336 510 Pfam TAF RNA Polymerase I subunit A 83 497 IPR039495 GO:0000120|GO:0006360
Tsu02g04336 510 PANTHER TAF RNA POLYMERASE I SUBUNIT A 17 496 - -
Tsu02g04336 510 MobiDBLite consensus disorder prediction 1 37 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04336 - - cam:101507338 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04336 02 51939075 51946955 Tsu02g04336 02 51939075 51946955 ECH