Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04311 aTGGCGTTGCGTCACATAAGATTCTTCCCTCACACACTTGTTACTTCTAGAAACTTCACTCccaaactcaaaatcaaccataaccgtttcttcttctctccttcacactcttcttcttcttcttcttcttcttccaccgTCACTGCTATGGCTTCAAATGCTCGTAAAGTCTTGGTTCCGATCGCCGATGGCACCGAACCTATGGAAGCTATAATCACCATCGACGTTATCCGTCGATCCGGAGCTGACGTCACCGTTGCATCCGCCGCTAACAATCTCTCCGTCAAAGCTCTCCACGGCGTTAAAATCATTGCTGATGCTTCTGTTTCCGATGTTGCCAATACCGCTTTCGACCTTATCGCTCTCCCTGGTGGGGTTCCAGGTGTGGACAATCTTAGAGACTCTGCTGTGTTGGAAGGCTTGGTAAAGAAGCACGTTGAGGATGGAAAGCTTTATGCTGCGGTGTGTGCTGCTCCTGCAGTGGTACTTGGGCCATGGGGTTTGCTGAATGGATTGAAGGCAACTTGTCATCCTTCATTCATGGAAAAATTGGCCTCTTACACTACTTCTGTCGAGTCAAGGGTGCAGCTGGATGGCAAAGTTGTGACCAGTCGTGCACCCGGTACCACTATGGAGTTTGCTGTTGCTATAGTTGAGCAATTATTTGGAAAGGAGAAAGCTGATGAAGTTGCAGGTCCACTGGTTATGCGCTCTAATCATGGCGATGAACATACTTTTTTAGAGCTAAACCCAGTGCAATGGACATTTGACAATCCACCCAAGATTCTTGTACCAATTGCTAATGGCACAGAAGAAATGGAAGCTGTGATTATCATTGATATTCTGCGACGAGCAAAGGCAAATGTTGTGGTTGCTTCTGTTGAGGACAAACTAGAGATTGAGGCATCACGTAAAGTTAAACTGGAGGCAGACATACTCCTTGACGAAGCGGCTAAACTTTCATATGACCTGATTGTGTTGCCTGGTGGACTTGGTGGTGCCCAAGCTTTTGCAAACTCGGACACCTTGGTGAATTTGTTGAAAAAGCAAAGAGAATCAAACAGATATTATGGAGCAATTTGTGCATCCCCAGCGTTAGTTTTGGAGCCCCATGGCTTGCTAAAGGGTAAAAAGGCCACAGCCTTTCCTGCCATGTGCAGCAAGTTATCAGATCAGAGTGAAGTAGAAAATAGGGTTGTCGTTGATGGTAACCTTATTACGAGCAGAGGCCCCGGAACCTCCATCGAGTTTGCATTAGTTATTGTGGAGAAGCTGTTTGGACGCAATTTAGCTCTAGAACTTGCAAAGACAACAGTGTTCACAAGCCCATAA 1332 0.4362 MALRHIRFFPHTLVTSRNFTPKLKINHNRFFFSPSHSSSSSSSSSTVTAMASNARKVLVPIADGTEPMEAIITIDVIRRSGADVTVASAANNLSVKALHGVKIIADASVSDVANTAFDLIALPGGVPGVDNLRDSAVLEGLVKKHVEDGKLYAAVCAAPAVVLGPWGLLNGLKATCHPSFMEKLASYTTSVESRVQLDGKVVTSRAPGTTMEFAVAIVEQLFGKEKADEVAGPLVMRSNHGDEHTFLELNPVQWTFDNPPKILVPIANGTEEMEAVIIIDILRRAKANVVVASVEDKLEIEASRKVKLEADILLDEAAKLSYDLIVLPGGLGGAQAFANSDTLVNLLKKQRESNRYYGAICASPALVLEPHGLLKGKKATAFPAMCSKLSDQSEVENRVVVDGNLITSRGPGTSIEFALVIVEKLFGRNLALELAKTTVFTSP 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04311 443 CDD GATase1_DJ-1 57 221 - -
Tsu02g04311 443 Gene3D - 48 248 IPR029062 -
Tsu02g04311 443 Gene3D - 256 442 IPR029062 -
Tsu02g04311 443 Pfam DJ-1/PfpI family 261 423 IPR002818 -
Tsu02g04311 443 Pfam DJ-1/PfpI family 55 220 IPR002818 -
Tsu02g04311 443 CDD GATase1_DJ-1 262 425 - -
Tsu02g04311 443 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 51 439 - -
Tsu02g04311 443 SUPERFAMILY Class I glutamine amidotransferase-like 259 440 IPR029062 -
Tsu02g04311 443 PANTHER BNAA06G01020D PROTEIN 51 439 - -
Tsu02g04311 443 SUPERFAMILY Class I glutamine amidotransferase-like 55 238 IPR029062 -
Tsu02g04311 443 TIGRFAM not_thiJ: DJ-1 family protein 261 436 IPR006287 -
Tsu02g04311 443 TIGRFAM not_thiJ: DJ-1 family protein 56 232 IPR006287 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04311 Tsu-Chr2 51556880 51560459 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04311 K03152 - gmx:100803116 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04311 02 51556880 51560459 Tsu02g04311 02 51556880 51560459 ECH