Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04288 ATGGCGATGATGCAACCAGCTATACGGCAAAGACGCTCTCAGATATCGGATCCACCGGCGCCATCATCGTCGTCATACTCAAAGCTCGACAAAGAGGCGAAATCGGACGGTAAAGATGAAGGGTTAAAGTGGTTATTACCATTTGTTGCTTTGGGATTTTTGAGATACATGAGTGCTACTTCTAATATCATTCATGATTGTGATGAGGTTTTCAATTATTGGGAacctcttcattttcttctctaTAAAACTGGTTTCCAAACTTGGGAATATAGTTCACAGTTTGCTCTTCGGTCGTATTTGTACCTTTTATTTCATGAAATAGTGGCTCGACCAGCTTTGTGGTTATTTGGTGACGAAAAAGTGAGAGTGTTCTATGCTGTGAGATTTTTTCTCGGTTTTCTCTCTGTTGTCACAGAGACCGTTCTTGTGGTAGCTGTTTCAAGAAAGTATGGAAAACGACTTGCTTCTTATACACTTGCTATGCTTTGCTTAGCCAGCGGCTGTTTCTTTGCTAGCACAAGTTTCTTGCCCAGTTCGTTTTCCATGTATGCAATCTCTCTTGCATCGGGCTTATTTCTTCTCGATAAACATGCTGCAGCAGTTGCTGTTTCTGCTATTGGTGTGATACTTGGCTGGCCATTCTCAATCTTGGCTTTCCTTCCCGTGACACTTTAttctttatatataaaattcaaaCCGGCATTTATTGCTGGGGCTGTCACATCAGTAATCCTTCTTGCATTGTCCGTAGTTACTGACTATTACTATTATGGAAAATGGACTTCATCTGTCTTAAATCTTCTAATATACAACGTAGCTGGAGGCGGTGAAAGCCATCTTTATGGGACTGAAGGACCTCTTTTTTATCTGAAGAATGGATTTaacaatttcaacttttgttttgttcttgCTATGCTGTTCTTGGCAATTTTGCCTATCGCTAAGAAGAAATATGCGTCAGACCTACTGATTGTGATATCTCCGTTATACATTTGGTTGGGTTTTATGTCTTTGCAGGCACATAAAGAAGAAAGGTTCCTATATCCAATATATCCACTTATTTGTCTTGCTGCTTCTGCTGTCATTGAGAGCTTTCCTGATCTTTTCCGTGACAAGTATGATTCATTTGACACTTCTATAATAGTGAAGGTAGCCAAGTTTCTGAGGCCGGTGGTTCTTAGCATTATATTATATGCCTCTCATGCTCGTACATTTTCTCTGATTCATGGTTACTCAGCTCCTATAGAGATTTACAAGCTTTTAGAGCACCACGACGATGTAGCAAATGGTTCTGTACTTTGTGTCGGAAGTGAATGGCATCGCTACCCATCATCATTTTTCGTCCCAGATTTTGTGGGACAAGTTCGATGGATCGATGATGGTTTCGGAGGTCTTCTTCCTTTCCAATTTAATTCTACCCTAGGTGGGACTGCTGCTGCACCACCATACTTTAACAACAAGAACAAGGCATCAGAAGAACAATACCTACATGATATCGATGCCTGCACTTTCCTTGTTGAGTTGCAGCTAAAGCGGCCTTACCTGACCCGAGGAAGTGACTTATCAACATGGGAGGTAATAGTCATTTACAATTCACAAAGTTTCTCATATTAA 1617 0.3952 MAMMQPAIRQRRSQISDPPAPSSSSYSKLDKEAKSDGKDEGLKWLLPFVALGFLRYMSATSNIIHDCDEVFNYWEPLHFLLYKTGFQTWEYSSQFALRSYLYLLFHEIVARPALWLFGDEKVRVFYAVRFFLGFLSVVTETVLVVAVSRKYGKRLASYTLAMLCLASGCFFASTSFLPSSFSMYAISLASGLFLLDKHAAAVAVSAIGVILGWPFSILAFLPVTLYSLYIKFKPAFIAGAVTSVILLALSVVTDYYYYGKWTSSVLNLLIYNVAGGGESHLYGTEGPLFYLKNGFNNFNFCFVLAMLFLAILPIAKKKYASDLLIVISPLYIWLGFMSLQAHKEERFLYPIYPLICLAASAVIESFPDLFRDKYDSFDTSIIVKVAKFLRPVVLSIILYASHARTFSLIHGYSAPIEIYKLLEHHDDVANGSVLCVGSEWHRYPSSFFVPDFVGQVRWIDDGFGGLLPFQFNSTLGGTAAAPPYFNNKNKASEEQYLHDIDACTFLVELQLKRPYLTRGSDLSTWEVIVIYNSQSFSY 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04288 538 Pfam Alg9-like mannosyltransferase family 48 450 IPR005599 GO:0016757
Tsu02g04288 538 MobiDBLite consensus disorder prediction 9 28 - -
Tsu02g04288 538 MobiDBLite consensus disorder prediction 1 34 - -
Tsu02g04288 538 PANTHER GLYCOSYLTRANSFERASE 48 530 IPR005599 GO:0016757
Tsu02g04288 538 PANTHER ALPHA-1,2-MANNOSYLTRANSFERASE ALG9 48 530 IPR039484 GO:0000030
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04288 30 530 Glycosyltransferase AT1G16900 74.206 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04288 K03846 - gmx:100805971 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04288 02 51115919 51122171 Tsu02g04288 02 51115919 51122171 ECH