Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04280 ATGTCTATTTTTCTTCACCCCAAAACCTCATTTCTCACTTTACTATTCTTATCATTCTCAACCTTCATTGCTCAAGCCATAGTTCCACAAAATGAAACCTTCAAATTTGTAAATTCAGGTGAACTTGGACCATTCATAGTAGAATATGGAGCTGATTATAGAATGATAAGCATATTCAATGCTCCATTCCAAGTTGGTTTTTACAACACTACACCAAATGCCTACACTCTAGCCCTTCGAGTCGGCCTTCAACGATCGGAAAGCCTTTTTCGATGGGTTTGGGAAGCAAATAGAGGCAACCCAGTTGGCGAAAATGCAACATTTTCATTAGGTGTTGATGGAAATCTTGTTTTAGCTAATGCTGATGGAAGAATTGTTTGGCAAACAAATACTTCTAACAAAGGTGTTGTTGCCTTTAGGTTACTTTCAAATGGTAACATGGTTTTAATTGATTCTAAAGGTAAATTTATTTGGCAAAGTTTTGATCATCCAACAGATACACTTTTGATAGATCAATATTTAAAGGCTAGTGGGCCTTCAAAACTTGTTAGTAGGctttcagaaaaagaaaatttagatGGGCCTTATAGTTTAGTTTTAGAGCCCAAAGGTTTGGCTTTATATTACAAGAGTAAAAATTCACCTAAACCTATTCTCTATTGGTTTTCATCTGATTGGTTTACAATTCAACAAGGTTCATTAGAAAATGTCACACTAAAATCTGATCAAGAATCTTTTGAGattggatttgatttttttgttgctaattcTTCAACTTTTGGTAATAGAATTATTGGTAGGCCAGTGAACAATAGTACCTTGACATATCTTAGGCTTGGAATTGATGGTAACATTAAATTTCACACATATTTCCTAGATGTACGTGATGGTGTTTGGAAAGTGACATATACTCTATTTGATAGAGATTTTGATGAGAGTGAATGTCAATTGCCAGAAAGATGTGGAAAATTTGGGCTTTGTGAGGATAATCAATGTGTTGGTTGTCCATTAGAGAATGGAATATTTGGTTGGAGCAATAAGTGTAGTCCTAAGCCTTTAGGAGTATGCAAAGCAAGTGAATTTCATTACTATAAAATTGAAGGTGTTGAACATTATATGAGCAAATACACTATTGGTGATAGAGTTAGTGAAGATAATTGTGGAAATAAATGTACCAAGGATTGCAAGTGTGTTGGGTATTTTTACCATAAGGATAATTCAAGATGTTGGATAGCTTATGATCTTCAAACTCTTACTAAAGTTGCTAATACCACACATGTTGGTTATATTAAGTTTCGTGTAAACAGCGGCATAGTCCGTCGTCGGTCACTCATATTAATTCCACCGGTGTTGTTTTATCACCATTTTGGTAGCGATATGGAAATGGAGGAGGGACATTTTGTGTCCAAATTGAGAACGAAACAGAGTCCACATATTGGGCATAGAGCTGGAGCAACTAAGCTGGCTTCTGTAGTGATTGGAAAACAAGAGGGACTTGCGGGCCAAACTCTCCCAGTCCATGTAGTGGATGGTGGAACAGCTAAGCGGACTTCTGCAGGACCAAAACAAACCCTAAAGACCCTACAAAACTTTTTGGTGACTAACCGAAATGCGTGCTACCAAATTGGACACCATAGTTAG 1641 0.3577 MSIFLHPKTSFLTLLFLSFSTFIAQAIVPQNETFKFVNSGELGPFIVEYGADYRMISIFNAPFQVGFYNTTPNAYTLALRVGLQRSESLFRWVWEANRGNPVGENATFSLGVDGNLVLANADGRIVWQTNTSNKGVVAFRLLSNGNMVLIDSKGKFIWQSFDHPTDTLLIDQYLKASGPSKLVSRLSEKENLDGPYSLVLEPKGLALYYKSKNSPKPILYWFSSDWFTIQQGSLENVTLKSDQESFEIGFDFFVANSSTFGNRIIGRPVNNSTLTYLRLGIDGNIKFHTYFLDVRDGVWKVTYTLFDRDFDESECQLPERCGKFGLCEDNQCVGCPLENGIFGWSNKCSPKPLGVCKASEFHYYKIEGVEHYMSKYTIGDRVSEDNCGNKCTKDCKCVGYFYHKDNSRCWIAYDLQTLTKVANTTHVGYIKFRVNSGIVRRRSLILIPPVLFYHHFGSDMEMEEGHFVSKLRTKQSPHIGHRAGATKLASVVIGKQEGLAGQTLPVHVVDGGTAKRTSAGPKQTLKTLQNFLVTNRNACYQIGHHS 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04280 546 SMART blect_4 47 164 IPR001480 -
Tsu02g04280 546 CDD PAN_AP_plant 359 431 - -
Tsu02g04280 546 Gene3D - 59 162 IPR036426 -
Tsu02g04280 546 ProSiteProfiles PAN/Apple domain profile. 356 434 IPR003609 -
Tsu02g04280 546 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 226 IPR036426 -
Tsu02g04280 546 PANTHER CURCULIN-LIKE (MANNOSE-BINDING) LECTIN FAMILY PROTEIN-RELATED 10 432 - -
Tsu02g04280 546 PANTHER - 10 432 - -
Tsu02g04280 546 Pfam D-mannose binding lectin 93 177 IPR001480 -
Tsu02g04280 546 CDD B_lectin 47 164 IPR001480 -
Tsu02g04280 546 ProSiteProfiles Bulb-type lectin domain profile. 31 162 IPR001480 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04280 - - gmx:100804561 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04280 02 50906052 50908407 Tsu02g04280 02 50906052 50908407 ECH