Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04235 ATGGATCATAAGACTACGATAAATTGGTCTGAATCATTCAACAAAGTcgatgaaaatgaagaaattgaagagcAAAGAGTTGCAACAGAAGCACTTCTTTCAAAGCTATTTGCTAGCATTGCAACGGTTAAAGGTGCTTATGCTGAACTTCAACATTTTCAATCACCTTTTGATCCTGATGGAATTGAAGCTTCTGATAAGCTACTAGTTTCCGAGTTGAAGCATTTGTCTGAGCTAAAACAAtgttacttgaagaaacaagTTGATCCTTCGCCTGAGAAAGCGATACTCGTAGCTGAGTCGAAGGAGATAAAGGGTGTCATAAAAACATATGAAATTACGGCGAAGAAGTTGGAATCACAGGTAAGGCTTAAAGATTCTGAGATTATGTTTCTTAAAGAGAAATTAGTAGAAGCTAATAGTCATAACAAGTTAATTGAGAAGAGATTGAATCAAAGTGGATCGTTATCTGGTGTACTTGAAAATACTAATCTTCACATATCAGGATTAAGTCCTAGCCATTTTGCTAGTGTTCTTCGTCATGCGGTAAAGTCGATTCGTAACTTTGTGAGGCTAATTGTTGATGAAATGAGATCTGCAAATTGGGATATTGATGCTGCTGTTGATGCTATTGAACACAATGTTGTTTACATCATAGAAGATCACAAATGTTTTGCAATCGAATCCTTTGTTTGCAAAGAAATGTTCGATGCGTTCCACTTCCCTAACTTCAATCTTCCAAATGAGTCACTTCCAAGTGATaggaaaaatcaacaaaattggtTCTTTGAGAATTTCAATGAGCTGAAATCAACTAAAGTTAAAGACTTTCTTGCTGAGAAACCGAGATCATCGTTTGCAAAATTCTGCAGGAACAAGTATTTGAGACTTGTTCATCCGAAAATGGAGTCATCGTTTTTCGGTAACATGCTTCATAGAAACCTGTTGAGTGGTGGCGAGTTTCCAAAATCTGATTTTTTCGCTTCATTTGCTGAAATGGCCAAAAGGGTTCATCTCTTACATTGTTTAGCTTTCTCTTTTGAGATTCAAGCTGAAATTTTTCAAGTTGGGAAAGGGTGTAGATTTTCTGATGTGTACATGGAAAGTGTGAATGATGAAATGTTTGTGTTTTCAGACAAGACAACAACATATGAtgaatcagaagaagaaacagttGTTGGTTTCACTGTTGTTCCTGGTTTTAAGATtggtaaaactattttacagtCTCAAGTTTACCTCACTAAGAAGAAAAATCAAACCAAGGTGAAAGGATTGGTGAAAGGATCACGATCACATGCAGGTCCGAGTTTACCTAGTAGTTAA 1326 0.3371 MDHKTTINWSESFNKVDENEEIEEQRVATEALLSKLFASIATVKGAYAELQHFQSPFDPDGIEASDKLLVSELKHLSELKQCYLKKQVDPSPEKAILVAESKEIKGVIKTYEITAKKLESQVRLKDSEIMFLKEKLVEANSHNKLIEKRLNQSGSLSGVLENTNLHISGLSPSHFASVLRHAVKSIRNFVRLIVDEMRSANWDIDAAVDAIEHNVVYIIEDHKCFAIESFVCKEMFDAFHFPNFNLPNESLPSDRKNQQNWFFENFNELKSTKVKDFLAEKPRSSFAKFCRNKYLRLVHPKMESSFFGNMLHRNLLSGGEFPKSDFFASFAEMAKRVHLLHCLAFSFEIQAEIFQVGKGCRFSDVYMESVNDEMFVFSDKTTTYDESEEETVVGFTVVPGFKIGKTILQSQVYLTKKKNQTKVKGLVKGSRSHAGPSLPSS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04235 441 PANTHER OS01G0203800 PROTEIN 8 414 - -
Tsu02g04235 441 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 8 414 IPR040225 GO:0009639|GO:0009959
Tsu02g04235 441 Coils Coil 115 135 - -
Tsu02g04235 441 Pfam Plant protein of unknown function (DUF641) 26 149 IPR006943 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04235 Tsu-Chr2 50281613 50282938 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04235 - - gmx:100799419 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04235 02 50281613 50282938 Tsu02g04235 02 50281613 50282938 ECH