Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04229 atgaaaactaactctctaCTCTTCTACACTCTCATTCTACTTGCTTCCACTTTCTCTCTCCATTTTCAAGCTCACGCTGCTCCTGCAGGGCCATTGATTAAGCATTTATCTTCACTTATTAAATGGACAAGGTCTGCTACTGCTAAGTCACCACATTCAGatGGGAATGTTCTTCAATTTGAGAATGGTTATGTAGTTGAGACTGTTGTAGAAGGAAATGAGATTGGAGTTATTCCTTATCGGATCCGTGTCTCTGAAGAGGATGGTGAACTCTTTGCTGTTGATGAAGTTAATAGCAACATTGTTCGAATCACACCGCCACTGTCTCAATATAGTCGAGGAAGATTAGTAGCTGGGTCATTTCAGGGCTACACTGATCATGTGGATGGAAAACCTAGTGATGCTCGGTTTAATCATCCCAAAGGTATAGCTATGGATGATAAAGGGAATGTTTATGTTGCTGATACTCAGAATCTTGCCATCAGAAAAATCGGTGATGCTGgtGTGACAACCATTGCTGGAGGAAAGTCAAATGTTGCTGGCTACAGAGATGGGCCGAGTGAAGATGCGAAGTTCTCGAATGATTTCGATGTGGTATATGTTCGTCCAATCTGTTCCTTGTTAGTCATTGATAGAGGAAATGCTGCTCTTCGGAAAATTATTCTTGACCAGGAGGACTGTGATTACCAATCAAGTTCAATTTCAAGCACAGATATCCTTACGGTTGTTGGCGCTGTTTTGGTTGGATATGCTACATGCATGCTTCAGCAGGGATATGGATCCTCTTTCTTCTCAAAAACAATAAGACAATCAAGAAGAGAGTTTAAAGGCCATGTGAGCAGCGAGAAACACATGCCAATCCCAGAAAGCAGTAAAGAGGATCCTGGATGGCCATCTTTTGGGCAGCTTATTGCCGATCTTTCTAAGCTATCCTTTGAAGCTTTGGCTAGTACATTCACTCAATTCATACCCTCACACTTCAAATCTAACGGCCCCAAAACAGGACTAACACCACTGAAGGATCGTCTTGTGATGCCTGAAGATGAAGTTGTGCGTCCATTGGTCAATAGGAAAAGCACTCCTGTTACTGTTACTGAAAATAGGCAGATGCCACAGGTTCATACTCCAACCACTGCTGAGAAATATTCAGAAGTAAAGCCTCCAAAGATAAAATCCAGCAGTTTCAAGGACCCTGCGTTGTCAAGTAAGCACCGATCTTCAAAACGATCTGAGTATGCTGAATTCTATGGATCTGGTGAGGTTCCACCGTATGCTAAATCTAAGAGCCAAAAAGAAAGGACAAAACATCGGAACCGAGAAAAGAGTGGAgaagttgtttttgcaaaaaatGGAGCTGAAGCTAAACCTGTTGATCCGAGACCGGCTGTTGATCACAGCAATTCAAAATTTGATCGGTACAGTATGAGGACTAGTTATGTACCTGGAGAGTCATTCCGATTCAACTCTCAGTAA 1473 0.4141 MKTNSLLFYTLILLASTFSLHFQAHAAPAGPLIKHLSSLIKWTRSATAKSPHSDGNVLQFENGYVVETVVEGNEIGVIPYRIRVSEEDGELFAVDEVNSNIVRITPPLSQYSRGRLVAGSFQGYTDHVDGKPSDARFNHPKGIAMDDKGNVYVADTQNLAIRKIGDAGVTTIAGGKSNVAGYRDGPSEDAKFSNDFDVVYVRPICSLLVIDRGNAALRKIILDQEDCDYQSSSISSTDILTVVGAVLVGYATCMLQQGYGSSFFSKTIRQSRREFKGHVSSEKHMPIPESSKEDPGWPSFGQLIADLSKLSFEALASTFTQFIPSHFKSNGPKTGLTPLKDRLVMPEDEVVRPLVNRKSTPVTVTENRQMPQVHTPTTAEKYSEVKPPKIKSSSFKDPALSSKHRSSKRSEYAEFYGSGEVPPYAKSKSQKERTKHRNREKSGEVVFAKNGAEAKPVDPRPAVDHSNSKFDRYSMRTSYVPGESFRFNSQ 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04229 490 MobiDBLite consensus disorder prediction 276 290 - -
Tsu02g04229 490 Pfam NHL repeat 137 163 IPR001258 GO:0005515
Tsu02g04229 490 MobiDBLite consensus disorder prediction 276 296 - -
Tsu02g04229 490 MobiDBLite consensus disorder prediction 350 475 - -
Tsu02g04229 490 Gene3D - 40 221 IPR011042 -
Tsu02g04229 490 SUPERFAMILY NHL repeat 65 168 - -
Tsu02g04229 490 PANTHER NHL DOMAIN-CONTAINING PROTEIN 14 487 - -
Tsu02g04229 490 PANTHER - 14 487 - -
Tsu02g04229 490 MobiDBLite consensus disorder prediction 358 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04229 Tsu-Chr2 50212598 50217119 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04229 - - gmx:100797841 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04229 02 50212598 50217119 Tsu02g04229 02 50212598 50217119 ECH