Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04225 ATGTCAAACGTCGTCGTTTTGTTTCTCTCCCTTATCTCAATTGTCCAATGCTTTCACTCCACAAACTCAAAAATTCTTCTCCCGAGTCAACTCAAACGTGACTCGCTAATCTCATCAACGACGAGTTGTCCTGCGCCGGATCCTACTCTCTACTACCAACCGGTTATCGGAATTCTCACTCACCCCGGAGACGGTGCTTCCGGTCGTCTCAGTAATGCTACCGGTGCTAATTACATCGCTGCTTCCTATGTTAAATTTGTTGAAGCTGCTGGTGCTAGAGTTGTTCCACTCCTCTTTACTGAGTCAACAGAGATACTTCTTAAGAAGCTGGAATTGGTAAATGGGGTTCTCTTCACTGGGGGATGGGCGAAAGAAGGTTTATATTTTGAAACTGTTAAAACAATATTTAAGAAAGCTTTAGAGAAAAATGACGCTGGAGACTATTTCCCATTATATGGCGTCTGCTTAGGCTTCGAACTTATAACAATGATCATTAGCGAGGACAAtaatattcttgaagaatttGGAGCAAGAAATCAGGCAAGTAGCCTTCAATTTGTGGAGAATGCATATCTAGAAGGATCTGTATTTCAGAGATTTCCTCCAGACTTGTTACAGAAGTTGAGTACAGATTGTCTTGTCATGCAAAATCACTATTATGGCGTATCCCCAGGAAAACTCCTGAGCAATGAAAAGTTATCGAGTTTTTTCGAGATCTTGACAACTAGCACTGATGAAAATGATAAGGTTTATGTTTCCACAGTACGTTCACGTAATTATCCAGTGACTGGCTTCCAATGGCATCCAGAGAAAAATGCCTTTGAATGGGGCTCAGCAAAAATTCCACACACGGAAGATGCCATTCGGACGACTCAGTATGTTGCAAACTTTTTGATCAGTGAAGCAAGGAAATCCTTAAACAGACCAGATGCTCAGGAATTGCGAGACAATCTCATTTACAATTACAAACCCACTTATGGTGGGAAGGCAGGGAAAGGATATGACGaagtttatatatttgaataa 1026 0.4055 MSNVVVLFLSLISIVQCFHSTNSKILLPSQLKRDSLISSTTSCPAPDPTLYYQPVIGILTHPGDGASGRLSNATGANYIAASYVKFVEAAGARVVPLLFTESTEILLKKLELVNGVLFTGGWAKEGLYFETVKTIFKKALEKNDAGDYFPLYGVCLGFELITMIISEDNNILEEFGARNQASSLQFVENAYLEGSVFQRFPPDLLQKLSTDCLVMQNHYYGVSPGKLLSNEKLSSFFEILTTSTDENDKVYVSTVRSRNYPVTGFQWHPEKNAFEWGSAKIPHTEDAIRTTQYVANFLISEARKSLNRPDAQELRDNLIYNYKPTYGGKAGKGYDEVYIFE 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04225 341 Pfam Peptidase C26 54 270 IPR011697 GO:0016787
Tsu02g04225 341 Gene3D - 52 341 IPR029062 -
Tsu02g04225 341 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 69 307 - -
Tsu02g04225 341 PANTHER PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE 24 340 IPR015527 GO:0008242
Tsu02g04225 341 SUPERFAMILY Class I glutamine amidotransferase-like 75 327 IPR029062 -
Tsu02g04225 341 PANTHER FOLATE GAMMA-GLUTAMYL HYDROLASE 24 340 - -
Tsu02g04225 341 CDD GATase1_Glutamyl_Hydrolase 56 328 - -
Tsu02g04225 341 ProSiteProfiles Gamma-glutamyl hydrolase domain profile. 45 341 IPR015527 GO:0008242
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04225 Tsu-Chr2 50168643 50174187 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04225 K01307 - gmx:100796947 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04225 02 50168643 50174187 Tsu02g04225 02 50168643 50174187 ECH