Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04159 ATGTCTGTGTTTGCTTCATATGCCATTTGTAAAGTTGCCAAAGATGCAGCTGGAATTGCTGGTAATATCTTTGCTTTTGGATTATTTGTCTCTCCAATACCTACATTTAGGAGAATTATAAGAAATGGGTCAACAGAAATGTTCTCAGGATTACCATATATTTATTCCTTGATGAACTGCTTGATTTGCATGTGGTATGGAACTCCTTTGATATCAAATGATAATATTTTGGTTACAACTGTTAATTCAATTGGAGCAATCTTTCAATTTGTGTACATAATCATCTTTATGATGTGTGCCGAGAAAGAAAAGAAGGTTAAAATGTTTGCATGGTTGATTGCAATTCTTGGCATATTTGCAACCATATTGCTTGGAAGCTTGCAAATAGATGACATTATAATGCGCCGACTCTTTGTTGGGATTTTGAGTTGCGCATCTCTCATTTCAATGTTTGCGTCTCCATTGTTTATAATTAGATTGGTCATTCAGACGAAGAGTGTTGAATTCATGCCATTTTATCTCTCACTTTCTACCTTCCTAATGAGCACTTCTTTCTTAATTTACGGATTACTCAGCGATGATATCTTCATTTATCTGCCAAATGGGATAGGAACCATTTTGGGAATGGTCCAGTTGATATTGTTCTTCTACTATGAGAAGAAATCAAGAATAGATGCCGATGAAAGAATTGAAGAAGCTAGATATGAACAGTTGCTGCTGCCTGCTAGACATGATCTGAAACCGAAGCTCGCAATGTTGCTATTTGGTTCAAATTATTGGTTCAATTACTGTTGCACCCTTGAGAGTGACCAGAAGTTGCAACAAAGATATATTCTGTATATATTTTACGCCTATTTTTGGGAAGGTGAACTATGCTTCAAAGTTCAAAATGGTATTATAGAAAAAGATGCATTTTGCACCTTTCCTGCATTTGTTGGTGGCCTCTCTTACATTGATTACAGTGCAAATGAACAGAGGAGTGTTAGAGAGTGGATTGAAGTGGGTAGTGATGCAATATCAACAGCTTTTCCGTTATGGGTTACAATTGGGTGTGTGTTGGGTTTGGTGAGACCAAGTTCATTCAATTGGGTTAATCCTAAGTTGTGTACAATGGGACTTAGTGTAATTATGCTTGGTATGGGTATGACTCTTAGTCTTAATGATCTTCTTGATGCACTCTCTATGCCTAAAGAAGTTCTCTCTGGTTTTTTCCTTCAATATTCGGTTAGTTTACTCCTTCTCTCCAATTAg 1251 0.3645 MSVFASYAICKVAKDAAGIAGNIFAFGLFVSPIPTFRRIIRNGSTEMFSGLPYIYSLMNCLICMWYGTPLISNDNILVTTVNSIGAIFQFVYIIIFMMCAEKEKKVKMFAWLIAILGIFATILLGSLQIDDIIMRRLFVGILSCASLISMFASPLFIIRLVIQTKSVEFMPFYLSLSTFLMSTSFLIYGLLSDDIFIYLPNGIGTILGMVQLILFFYYEKKSRIDADERIEEARYEQLLLPARHDLKPKLAMLLFGSNYWFNYCCTLESDQKLQQRYILYIFYAYFWEGELCFKVQNGIIEKDAFCTFPAFVGGLSYIDYSANEQRSVREWIEVGSDAISTAFPLWVTIGCVLGLVRPSSFNWVNPKLCTMGLSVIMLGMGMTLSLNDLLDALSMPKEVLSGFFLQYSVSLLLLSN 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04159 416 Gene3D - 11 106 - -
Tsu02g04159 416 Pfam Sugar efflux transporter for intercellular exchange 138 222 IPR004316 GO:0016021
Tsu02g04159 416 Pfam Sugar efflux transporter for intercellular exchange 18 103 IPR004316 GO:0016021
Tsu02g04159 416 Gene3D - 137 230 - -
Tsu02g04159 416 PANTHER RAG1-ACTIVATING PROTEIN 1 9 229 - -
Tsu02g04159 416 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET2 9 229 - -
Tsu02g04159 416 Gene3D - 328 414 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04159 Tsu-Chr2 48807161 48812228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04159 1 240 Miscellaneous Gene Families AT3G14770 62.917 9.33e-100 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04159 K15382 - gmx:100305842 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04159 02 48807161 48812228 Tsu02g04159 02 48807161 48812228 ECH