Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04156 ATGCAAGCATCAATCACATACTCACCACTTCCAACTAAATTTATCAAATTCAGAACACAATCTTACACCAACACAAGCCAAACAATTTCTTCAAAACCAAATcctatttttcatcaaactaaACCATGTTCTCACCTCACAATACGCAATTTTCAACCTCAATCACCATTAAATCCATCCACATTAAAATCCCCCAAAATCTCCATCTACAATGTGGGTCCTCTTCGCTGCGGCATTTCATCGAACGGTGAGAGTGCAAATGTGGGTGGGAGGAGTTTTAGGGAGTTCGTTGAGGTTGCCGGTGAGGCGATATCGACGGCGTTTCCGTTATGGGTTACGATTGGCTGTGTGTTGGGTTTGTTGAGACCGAATTCGTTCAATTGGGTTACTCCTAAATTGAGCATTGTGGGACTTAGTGTAATTATGCTTGGTATGGGTATGACTTTAACTCTTGATGATCTTCGTTCTGCTCTTTCTATGCCTAAAGAAGTTCTTTCTGGTTTTTTCCTTCAATATTCGGTGATGCCATTATCCGCGTTTTTTATAAGCAAACTCTTAAATCTTCCATCACATTATGCAGCTGGTTTAATATTAGTTGGGTGCTGTCCAGGGGGCACAGCTAGTAACATTGTAACATATCTTGCACGTGGAAATGTGGCGCTTTCTGTTGTGATGACAGCTGCAAGCACTCTATCAGCCGTGATCATGACTCCTTATCTGACAGCCAAACTTGCTGGTAAATATGTTGCTGTGGATGCAGCTGGCTTATTAATGTCAACATTGCAGGTTGTGCTTTTTCCCGTATTGGCTGGTGCACTTCTGAATCAATATTTCAAACCTCTTGTTAAACTTGTGTCTCCATTGATGCCACCCTTAGCTGTAGCAACTGTGGCAATTTTATGTGGAAATGCAATTTCACAGAGTTCTTCTGCAATCCTTATGTCTGGTGGACAAGTTATCTTAGCTGTCTGCCTTCTTCATGCTTCCGGTTTTTTCTTCGGATACGTTCTTGCCAGGATTCTTGGGCTAGATGTGTCATCATCGCGAACTATATCCATTGAAGTTGGCATGCAGAACTCAGTTCTTGGCGTAGTTCTGGCTGCCAAGCACTTTGGAGATCCCTTAACAACAGTACCTTGTGCTGTTTCAAGTGTGTGTCACTCAATCTTCGGTAGCATCTTAGCAGGAATGTGGAGACGCTCTGTGCCACCTGAGATGAAGGGCAAGGACTGA 1233 0.4242 MQASITYSPLPTKFIKFRTQSYTNTSQTISSKPNPIFHQTKPCSHLTIRNFQPQSPLNPSTLKSPKISIYNVGPLRCGISSNGESANVGGRSFREFVEVAGEAISTAFPLWVTIGCVLGLLRPNSFNWVTPKLSIVGLSVIMLGMGMTLTLDDLRSALSMPKEVLSGFFLQYSVMPLSAFFISKLLNLPSHYAAGLILVGCCPGGTASNIVTYLARGNVALSVVMTAASTLSAVIMTPYLTAKLAGKYVAVDAAGLLMSTLQVVLFPVLAGALLNQYFKPLVKLVSPLMPPLAVATVAILCGNAISQSSSAILMSGGQVILAVCLLHASGFFFGYVLARILGLDVSSSRTISIEVGMQNSVLGVVLAAKHFGDPLTTVPCAVSSVCHSIFGSILAGMWRRSVPPEMKGKD 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04156 410 PANTHER SODIUM-BILE ACID COTRANSPORTER 40 406 IPR004710 -
Tsu02g04156 410 Pfam Sodium Bile acid symporter family 136 310 IPR002657 GO:0016020
Tsu02g04156 410 Gene3D - 94 401 IPR038770 -
Tsu02g04156 410 PANTHER SODIUM/METABOLITE COTRANSPORTER BASS1, CHLOROPLASTIC-RELATED 40 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04156 Tsu-Chr2 48790286 48794040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04156 31 407 Organic Solute Cotransporters AT1G78560 70.052 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04156 K03453 - fve:101292385 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04156 02 48790286 48794040 Tsu02g04156 02 48790286 48794040 ECH