Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04121 ATGGCTAAAGTGTCTCTtctctttttccttcttttcttaTCTCTCACATCAGGAGGGAATGTGAATATGGTTAATGGACAGaatactTGGTGTGTGGCAAAGCCTTCATCAGATCAAGCAACACTTTTATCAAACCTGAATTATGCATGCTCTCAAGTTGATTGCAAAATTCTTGAAAAAGGATACCCTTGCTCTAGTCCTGATAATCTCATCAACCGTGCTTCCATAGCTATGAATCTCTATTATCAATGTAGAGGGAAAAACCATTGGAATTGTGATTTCAGAGGATCTGGCCTAGTTGTTGTGACTAATCCAAGTTATGGAAATTGCATTTATGCGTAG 342 0.3596 MAKVSLLFFLLFLSLTSGGNVNMVNGQNTWCVAKPSSDQATLLSNLNYACSQVDCKILEKGYPCSSPDNLINRASIAMNLYYQCRGKNHWNCDFRGSGLVVVTNPSYGNCIYA 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04121 113 Pfam X8 domain 29 98 IPR012946 -
Tsu02g04121 113 PANTHER BETA-1,3 GLUCANASE 5 113 IPR044788 -
Tsu02g04121 113 SMART X8_cls 29 112 IPR012946 -
Tsu02g04121 113 PANTHER MAJOR POLLEN ALLERGEN OLE E 10-LIKE 5 113 - -
Tsu02g04121 113 Gene3D - 22 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04121 Tsu-Chr2 48158563 48160854 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04121 30 111 Glycoside Hydrolase AT2G39640 40.964 3.31e-18 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04121 - - cam:101502498 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04121 02 48158563 48160854 Tsu02g04121 02 48158563 48160854 ECH