Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04120 ATGATGTCTGTCACTAGTAAAAGTATtgatttttttgggaaaaaCAACTTGGTTTCTTGTGGTTGTTCTTCCAATGCTTCGTTTCATAGGTATAAGGTGAAGAATTTTGCTAAGGTGAATTCTAAAGGGTGTGGTAATGGAGCTCGTAAATTGGTTTGTTGTAAGAAGAGGAACACTCCTAAATACAGTGTTTCTTCTATGGAGACTGCAGAGCCTACTTTGAATGGTGGGGCTCAAGCAATTAAAAACCTTGCAAAAGGATTGAACTTGAAGACTTATTCAGAAACCCCTATTTCGCCTAATAGGTTGTTTGAAGTAGTAGCTGATGATCTTCAAACACTCAATAAAAATCTTCAATCTATTGTAGGAGCAGAAAATCCAGTTTTAATATCTGCAGCTGAGCAGATCTTTAGTGCTGGTGGGAAGAGGATGAGACCAGCTCTCGTTTTCTTGGTGTCAAGGGCGACTGCAGAGCTACATGGCCTCGAGGATCTTACTGTAAAGCATCGACGTTTAGCTGAGATAATTGAAATGATTCATACTGCAAGTTTGATACATGATGATGTGTTAGATGAGAGTGACCTAAGAAGAGGGAAGGAAACTGTTCATCAAATGTTTGGAACAAGAGTGGCAGTGCTAGCTGGAGACTTCATGTTTGCACAGTCATCATGGTATCTCGCCAACCTTGAAAATATCGAAGTCATTAAACTTATCAGTCAGGTGATTAAAGATTTTGCTAGTGGAGAAATAAAGCAGGCTTCTAGCTTGTTTGATTGCGATGTTCAACTCGACGAGTATCTAATCAAAAGTTATTTTAAGACAGCATCCTTGATTGCTGCTAGTACAAAAGGAGCAGCGGTTTTCAGCGGTGCTGACAGCAGCATGACCGAGAAAATGTACGAATACGGGAAGAATCTCGGTCTATCCTTCCAAGTTGTGGACGACATATTGGATTTCACACAATCACAAGAGCAACTTGGAAAGCCTGCCGGCACTGACCTTGCCAAAGGTAATCTGACTGCTCCTGTAATATTCGCATTGGAGAAAGAACCGAAATTGAGGGATATCATTGAGTCTGAATTTAGCGAGATTGGTTCACTGGATGAGGCGATTGAGTTGGTCAAGAGTTGTGGCGGAATTGAAAGAGCACAAGAGTTGGCGAAAGAGAAAGCTGATCTTGCTATTCAAAATCTTCAATGCCTTCCTCAAAGTGTGTATCGAGTAGCTCTCGAGGATATGGTGAGATATAATCTTCAAAGGATTGCATAA 1269 0.4043 MMSVTSKSIDFFGKNNLVSCGCSSNASFHRYKVKNFAKVNSKGCGNGARKLVCCKKRNTPKYSVSSMETAEPTLNGGAQAIKNLAKGLNLKTYSETPISPNRLFEVVADDLQTLNKNLQSIVGAENPVLISAAEQIFSAGGKRMRPALVFLVSRATAELHGLEDLTVKHRRLAEIIEMIHTASLIHDDVLDESDLRRGKETVHQMFGTRVAVLAGDFMFAQSSWYLANLENIEVIKLISQVIKDFASGEIKQASSLFDCDVQLDEYLIKSYFKTASLIAASTKGAAVFSGADSSMTEKMYEYGKNLGLSFQVVDDILDFTQSQEQLGKPAGTDLAKGNLTAPVIFALEKEPKLRDIIESEFSEIGSLDEAIELVKSCGGIERAQELAKEKADLAIQNLQCLPQSVYRVALEDMVRYNLQRIA 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04120 422 ProSitePatterns Polyprenyl synthases signature 2. 306 318 IPR033749 -
Tsu02g04120 422 TIGRFAM prenyl_cyano: solanesyl diphosphate synthase 99 421 - -
Tsu02g04120 422 SUPERFAMILY Terpenoid synthases 102 420 IPR008949 -
Tsu02g04120 422 CDD Trans_IPPS_HT 124 420 IPR000092 GO:0008299
Tsu02g04120 422 SFLD Isoprenoid Synthase Type I 133 418 - -
Tsu02g04120 422 Pfam Polyprenyl synthetase 128 373 IPR000092 GO:0008299
Tsu02g04120 422 PANTHER SOLANESYL DIPHOSPHATE SYNTHASE 2, CHLOROPLASTIC 4 421 - -
Tsu02g04120 422 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE 4 421 - -
Tsu02g04120 422 Gene3D Farnesyl Diphosphate Synthase 99 421 IPR008949 -
Tsu02g04120 422 ProSitePatterns Polyprenyl synthases signature 1. 184 198 IPR033749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04120 Tsu-Chr2 48141946 48146557 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04120 K05356 - gmx:100783538 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04120 02 48141946 48146557 Tsu02g04120 02 48141946 48146557 ECH