Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03733 ATGGTTTtagtaacaacaacaacaacaataacaccATTTTGTTCCTCTCTATTACATTATTCCACAACCAGATACGTCGTCGTTCGATGCACTCGTAACAGCAGCAGCGTTGTTCAGGAGATAGATGAGAAATCAGAGAATGTGTTTCCTCCATTGAAAGCAGCAAAGAGAGTGGTGCTTGTTAGACATGGACAAAGCACGTGGAATGCTGAAGGGAGGATTCAAGGTAGTTCTGATTTCTCTGTTCTTACTAAGAAAGGTGAGTCTCAAGCTGAGACTTCACGTCAAATGCTCTTTGACGATAACTTCGACGCTTGTTTCTCGAGtccTTTAGCGCGATCAAAAAGAACTGCTGAAATCATTTGGGGACCTCGCCAAGAACAAATTATTCCCGAGTTCGACCTACGGGAAATCGATTTGTACTCCTTTCAAggtttgttgAAGGAAGAGGGAAAAGCGAGATATGGTTCGGCCTTTCATCAATGGCAGGTAGATGCTTCGAATTTCATCATTGACGGTCATTATCCTGTGAGAGAGCTTTGGGATCGTGCTAGAAGCTGCTGGACTAAAATTCTAGCACATGATAGCAGGTCTGTTCTTGTGGTTGCTCACAATGCTGTTAATCAGGCTCTTGTTGCAACAGCAATTGGTTTGGAATCAGAATACTTCAGAACTTTACTTCAAAGCAATTGTGGTGTAAGTGTGCTGGATTTCACCCCAAGACCGGACGGTGGTACTCCCCATATTTGTCTTAACCGCTTAAACCAGACGCCTGGTTCACCTGTTGCCGGAGGGAAATCTGGAGGTAGAGCCGCAAGTAAGCGGATTGTTCTTGTTTGTAACGGATCTACTCAAGGAAACACAGAGGGTGGTTTTCTTGTTTCCGGTGATCAACCATTGAACATGCTTGGTGTTATACAGTCTCAGAAATCTGCAGAACTACTTCTTGATTTGTCTGTGAGTTCCATAATTAGCAGTCCTAACAAATCTTGTATCGAGACAGCCATGACCATATCCCAGGTACAAGAGGCGGCAGATTGCTTGGGTGCGGACTGTGTGCCACGCTATGTTGAGACAAAGCAAATGGGGTACCTTGATATTGAAACTATCTTCAAACAATCCAAAATGGATGTATCCAGTTTACCGCCATTTCAGCCTGGGTGGTTAAATGAAGTTGACGATGAATTGAGAACAAAATTATGGGATCAATCTGGAAATGCCTGGAAATCCTTGTTGGACGAAATATCCGATGAATCTAAATCAGGAGAAGTTATAGTTGCAGTTTCTCATCCTGCAATTCACATAGGACTAATGGCGCACTGCCTTAATTTAACAAAGGAATGGCTGGGAACATTTCATCTTGATGCAGGAAGCGTTAGCGTCCTTGACTTCCCTGATGGACCTAAGGGAAGCGGCGTAATCAGGTGCATAAATTATACTGCACACTTAGGGAGATGGTCCATCCCTATTACAAGACCAACAATAGAGGATGTTGAAgatttttaa 1506 0.4216 MVLVTTTTTITPFCSSLLHYSTTRYVVVRCTRNSSSVVQEIDEKSENVFPPLKAAKRVVLVRHGQSTWNAEGRIQGSSDFSVLTKKGESQAETSRQMLFDDNFDACFSSPLARSKRTAEIIWGPRQEQIIPEFDLREIDLYSFQGLLKEEGKARYGSAFHQWQVDASNFIIDGHYPVRELWDRARSCWTKILAHDSRSVLVVAHNAVNQALVATAIGLESEYFRTLLQSNCGVSVLDFTPRPDGGTPHICLNRLNQTPGSPVAGGKSGGRAASKRIVLVCNGSTQGNTEGGFLVSGDQPLNMLGVIQSQKSAELLLDLSVSSIISSPNKSCIETAMTISQVQEAADCLGADCVPRYVETKQMGYLDIETIFKQSKMDVSSLPPFQPGWLNEVDDELRTKLWDQSGNAWKSLLDEISDESKSGEVIVAVSHPAIHIGLMAHCLNLTKEWLGTFHLDAGSVSVLDFPDGPKGSGVIRCINYTAHLGRWSIPITRPTIEDVEDF 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03733 501 Pfam Histidine phosphatase superfamily (branch 1) 58 240 IPR013078 -
Tsu02g03733 501 Pfam Histidine phosphatase superfamily (branch 1) 276 467 IPR013078 -
Tsu02g03733 501 Gene3D - 268 487 IPR029033 -
Tsu02g03733 501 SUPERFAMILY Phosphoglycerate mutase-like 274 488 IPR029033 -
Tsu02g03733 501 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 60 69 IPR001345 GO:0003824
Tsu02g03733 501 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 29 241 - -
Tsu02g03733 501 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 419 497 - -
Tsu02g03733 501 SUPERFAMILY Phosphoglycerate mutase-like 56 252 IPR029033 -
Tsu02g03733 501 CDD HP_PGM_like 275 475 IPR013078 -
Tsu02g03733 501 CDD HP_PGM_like 57 244 IPR013078 -
Tsu02g03733 501 Gene3D - 56 258 IPR029033 -
Tsu02g03733 501 SMART PGAM_5 275 437 IPR013078 -
Tsu02g03733 501 SMART PGAM_5 57 211 IPR013078 -
Tsu02g03733 501 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 29 241 - -
Tsu02g03733 501 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 419 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03733 Tsu-Chr2 42209928 42217216 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03733 K22200 - gmx:100794084 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03733 02 42209928 42217216 Tsu02g03733 02 42209928 42217216 ECH