Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03721 ATGGCTGAATCAGAACCCAAAGTTTTTATACCAGATAATTTTCAAGTGAACTATGATGTTTCAAGTCAAATTAAGATGATTTGGGAAGTTATGAAAGCACCATTAATTGTTCCTCTTTTGAATGCTTGTGTTTACATTTCATTAGCAATGGCACTTATGCTTTTCATGGAAAGAGTTTATATGggtattgttattgttttaattaaactCTTTTGGAAAAAACCTGAACAACGTTATAATTATGAACCTCTTCAAGATGATGAAGAACTTGGTGGCTCTAATTTTCCTGTTGTTCTTGTTCAAATTCCAATGTTCAATGAAAGAGAGGTTTACAAGGTTTCAATCGGAGCTGCGTGTGGACTTTCATGGCCGACGGATCGACTCGTGATCCAAGTACTTGATGATTCTACTGACCCTGTGGTCAAGCAAATGGTGGAAATGGAATGCCAAAGATGGGCAAGTAAAGGAATAAatataacatatcaaattagaGAAACAAGAGGTGGATACAAAGCAGGAGCATTAAAAGAAGGATTAAAACGTAGCTATGTTAAGCATTGTGAATATGTTGTTATTTTCGATGCTGATTTTAGTCCACCACCTGGTTTTCTTAGAAGAGCTATTCCTTTTCTTGTTGGAAATCCTGAACTTGCTCTTGTTCAAGGTCGTTGGAGATTTGTGAATTCAAATGAGTGTTTGTTGACAAGAATGCAAGAGATGTCTTTGGATTATCATTTCACAGTTGAGCAAGAAGTTGGATCAGCTACTCATGCTTTCTTTGGTTTCAATGGAACGGCTGGTATTTGGAGAATAGCTGCAATCAACGAAGCAGGAGGGTGGAAAGACAGAACAACAGTCGAAGATATGGACCTTGCTGTTCGAGCAAGTCTTAGGGGCTGGAAATTTTTGTACCTTGGAGACCTCCAGGCAAATAGTGAACTTCCAAGTACTTTGAGAGCCTTCAGATTCCAGCAGCATAGATGGTCTTGTGGTCCTGCTAATCTGTTCCGCAAAATGGCGATGGAGATTATAAGGAACAAGAAAGTGAAATTCTGGAAGAAAGTGTATGTTATATACAGCTTTTTCTTCGTCCGCAAAATCATAGCTCATATGGTCACTTTCTTCTTCTACTGTCTTGTAATCCCCCTCACAATTTTGGTTCCTGAGGTTCATGTTCCAATTTGGGGCGCCGTTTATATTCCTTCCATCATCACCATTCTCAACTCCGTCGGAACACCAAGGTCTATTCATCTTCTGTTCTATTGGATCCTTTTCGAGAATGTCATGTCTTTGCACCGTACCAAGGCGACCCTTATCGGTTTACTTGAATATGGAAGGGCTAATGAATGGGTTGTAACTGAAAAACTCGGAGATTctgtcaacaacaacatcaaaagCAAATCTGGAGATGCTGCCAAGAAGACTAATGCCAAAGttcaaaagaaaacaagatCCAAATTTATGGAAAGGCTTAACTTTTTGGAGCTGGGATTTGCAGTGTTTCTCTTCTTCTGTGGATGCTATGATTATAATTATGGGAAACACAACTACTTTATTTACCTATTCCTTCAAACCTTAACCTTCTCAATTGTTGGATTTGGTTATGTTGGAACCATAGTGTAA 1623 0.3722 MAESEPKVFIPDNFQVNYDVSSQIKMIWEVMKAPLIVPLLNACVYISLAMALMLFMERVYMGIVIVLIKLFWKKPEQRYNYEPLQDDEELGGSNFPVVLVQIPMFNEREVYKVSIGAACGLSWPTDRLVIQVLDDSTDPVVKQMVEMECQRWASKGINITYQIRETRGGYKAGALKEGLKRSYVKHCEYVVIFDADFSPPPGFLRRAIPFLVGNPELALVQGRWRFVNSNECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGIWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQANSELPSTLRAFRFQQHRWSCGPANLFRKMAMEIIRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFFFYCLVIPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATLIGLLEYGRANEWVVTEKLGDSVNNNIKSKSGDAAKKTNAKVQKKTRSKFMERLNFLELGFAVFLFFCGCYDYNYGKHNYFIYLFLQTLTFSIVGFGYVGTIV 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03721 540 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 87 315 IPR029044 -
Tsu02g03721 540 PANTHER BNAC09G36340D PROTEIN 5 540 - -
Tsu02g03721 540 PANTHER - 5 540 - -
Tsu02g03721 540 SUPERFAMILY Nucleotide-diphospho-sugar transferases 93 376 IPR029044 -
Tsu02g03721 540 CDD CESA_CaSu_A2 96 332 - -
Tsu02g03721 540 Pfam Glycosyl transferase family group 2 189 381 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03721 Tsu-Chr2 42083599 42090292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03721 1 540 Miscellaneous Gene Families AT5G22740 78.967 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03721 K13680 - gmx:100791645 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03721 02 42083599 42090292 Tsu02g03721 02 42083599 42090292 ECH