Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03690 aTGGGAAAACACTCTCATTTTCCCATCACTCTTCTCTTCCTTGCTTCCTTTTTTCTTCTACAAAACGTAACAGCTTTCAAAAATCAAGATGGGTCAGAAGAATGGGGCTATGTTCAAGTTAGACCCAAAGCACACATGTTTTGGTGGCTATATAGAAGTCCATACAGAGTGGAAGATTCTTCAAAGCCATGGCCAATAATTCTTTGGTTGCAGGGTGGTCCTGGTGCTTCAGGTGTTGGATTTGGAAATTTTGCAGAAGTTGGACCTTTGGATACAAGCTTAAAGCCAAGGAATTCAACATGGTTGTTAAAAGCAGATCTATTGTTTGTGGACAATCCAGTTGGAACAGGATACAGTTTTGTGGAGGATCGAAAACTTTTTGTGAAAACAGATGATGAAGCAGCAACTGATTTGACCACATTGTTAATTAAGCTATTTaataatgatgaaaaactaCAAAAGAGTCCTCTGTATATTGTGGCAGAGTCTTATGGTGGCAAATTTGCTGTCACTCTTGGATTATCTGCTCTTAAAGCTATTGAAGACAAGAAATTGAAGCTCACACTTGGAGGTGTGGCATTAGGAGACAGTTGGATCTCACCAGAAGATTTTGTGTTCTCATGGGGTCCTCTCCTCAAAGATGTCTCAAGACTTGATGATAATGGTCTGGAAAAATCAAATAgTATAGCTGAGAGGATCAAGAAGCAACTTGAAGATGGTAAATTTGTTGATGCAACCAACTCATGGAGTGAACTTGAAAATGTGATTTCTGCTAGAAGTAACAATGTGgatttttacaattttttggtGGATGCGGGAAGTGATTCAGCAACCATAGCAGCATCGGAACTGGGATTACTCAAAGAAATATCAATGAAGCGGTACTCCAAGTATCTTACATCCATAAGGACAAGGTCTTCTACTCCTGGTGGTGAAGATGATATTGATACTTTATTAAATGGTGTTATAAAGAAGAAGTTAAAGATCATCCCTGAGAATGTCACATGGGGAGGTCAGTCCAATGATGTTTTCAATTATCTTGAAGGTGATTTTATGAAGCCAAGAATTGATGAGGTTGATCAGCTACTGGCTAAGGGAGTCAATGTTACTGTGTACAATGGACAAATTGATCTGATTTGTGCTACCAAGGGGACTGAAGCATGGCTTAGGAAACTCAAGTGGGAAGGGCTTAGAAGCTTCTTGGGGAAAGACAGAACAGCCCTCTACTGTGGAAGTGACAAAACAACCAAAGGCTTTTACAGATCATACAAAAACCTACAATTTTATTGGATTCTTGGAGCTGGTCATTTTGTAAGTCAACAACACCAATCCTCATTAAATTTAAAACAGCTATGCACGTTTCATTCATTGCACAATAGTAACTTCTAA 1389 0.3823 MGKHSHFPITLLFLASFFLLQNVTAFKNQDGSEEWGYVQVRPKAHMFWWLYRSPYRVEDSSKPWPIILWLQGGPGASGVGFGNFAEVGPLDTSLKPRNSTWLLKADLLFVDNPVGTGYSFVEDRKLFVKTDDEAATDLTTLLIKLFNNDEKLQKSPLYIVAESYGGKFAVTLGLSALKAIEDKKLKLTLGGVALGDSWISPEDFVFSWGPLLKDVSRLDDNGLEKSNSIAERIKKQLEDGKFVDATNSWSELENVISARSNNVDFYNFLVDAGSDSATIAASELGLLKEISMKRYSKYLTSIRTRSSTPGGEDDIDTLLNGVIKKKLKIIPENVTWGGQSNDVFNYLEGDFMKPRIDEVDQLLAKGVNVTVYNGQIDLICATKGTEAWLRKLKWEGLRSFLGKDRTALYCGSDKTTKGFYRSYKNLQFYWILGAGHFVSQQHQSSLNLKQLCTFHSLHNSNF 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03690 462 PANTHER CARBOXYPEPTIDASE 7 442 - -
Tsu02g03690 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 426 439 IPR001563 GO:0004185|GO:0006508
Tsu02g03690 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 120 IPR001563 GO:0004185|GO:0006508
Tsu02g03690 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 170 IPR001563 GO:0004185|GO:0006508
Tsu02g03690 462 Pfam Serine carboxypeptidase 30 443 IPR001563 GO:0004185|GO:0006508
Tsu02g03690 462 ProSitePatterns Serine carboxypeptidases, serine active site. 159 166 IPR018202 GO:0004185
Tsu02g03690 462 Gene3D alpha/beta hydrolase 17 451 IPR029058 -
Tsu02g03690 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 7 442 IPR001563 GO:0004185|GO:0006508
Tsu02g03690 462 SUPERFAMILY alpha/beta-Hydrolases 23 440 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03690 Tsu-Chr2 41615653 41620222 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03690 K09646 - gmx:100808412 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03690 02 41615653 41620222 Tsu02g03690 02 41615653 41620222 ECH