Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03677 ATGGCATCATCAACattatcttctctctcttccactTCTTCACTACCATTGCAACACACTTTCACTTCTAACTTCAAAACTTCTTCTCAATTTCCCAACAAAACTTCACCTTTTATCATTTTCGCTCAacagaaaacaaagaaaactcGAAAGATAATCTTGAAGGAAGATATTGTTAATATTGGAAAGAAAGGGGACCTTCTTGATGTAAGGGCTGGGTTTTTCAGAAATTTTCTGTTTCCAACTGGCAAAGCTCAGATTGTAACTCCTACTATACTCAAGGAAATGAAGATAGAGGAAGAAAGAATTGAGGCTGAGAAACTAAGGGTAAAAGAAGAGGCACAGCAACTTGCTCTAATTTTTGAAACTGTGGGAGCTTTCAAGGTGAAGCGTAAAGGTGGTAAAGGAAAACAAATCTTTGGAagTGTTACGGCTCAAGATCTTGTGGACATAATCAAGTCACAGCTTCAAAGGGAGGTGGACAAGAGAATCGTTGATCTTCCGGATATCCGTGAAACAGGAGAATATATTGCAGAGTTAAAACTTCACCCAGAAGTTACAGCTAAAGTGAGGGTGAATGTTATAGCTAACTAA 594 0.3552 MASSTLSSLSSTSSLPLQHTFTSNFKTSSQFPNKTSPFIIFAQQKTKKTRKIILKEDIVNIGKKGDLLDVRAGFFRNFLFPTGKAQIVTPTILKEMKIEEERIEAEKLRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKSQLQREVDKRIVDLPDIRETGEYIAELKLHPEVTAKVRVNVIAN 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03677 197 PANTHER 50S RIBOSOMAL PROTEIN L9 1 197 IPR000244 GO:0003735|GO:0005840|GO:0006412
Tsu02g03677 197 Hamap 50S ribosomal protein L9 [rplI]. 50 197 IPR020594 GO:0003735|GO:0005840|GO:0006412
Tsu02g03677 197 Pfam Ribosomal protein L9, C-terminal domain 112 195 IPR020069 -
Tsu02g03677 197 Gene3D - 51 109 IPR036935 -
Tsu02g03677 197 Coils Coil 93 116 - -
Tsu02g03677 197 SUPERFAMILY Ribosomal protein L9 C-domain 106 196 IPR036791 -
Tsu02g03677 197 Pfam Ribosomal protein L9, N-terminal domain 51 96 IPR020070 -
Tsu02g03677 197 SUPERFAMILY L9 N-domain-like 51 106 IPR009027 -
Tsu02g03677 197 Gene3D - 110 197 IPR036791 -
Tsu02g03677 197 ProSitePatterns Ribosomal protein L9 signature. 62 89 IPR020070 -
Tsu02g03677 197 TIGRFAM L9: ribosomal protein bL9 51 196 IPR020594 GO:0003735|GO:0005840|GO:0006412
Tsu02g03677 197 PANTHER 50S RIBOSOMAL PROTEIN L9, CHLOROPLASTIC 1 197 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03677 K02939 - gmx:100500390 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03677 02 41386133 41389406 Tsu02g03677 02 41386133 41389406 ECH