Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03659 atGGAGAAGGTGATGAACATTCTAAAACCGAAGCCAAATTCGCAGGAAATATTGAGAGTTTGGCGACGTAAGCTTCGTCAACAGTCTCAAAACATTGATCGCCAAATTCGCGATATtcagagagaagaaaaaaaggtgCAGAAGGCTATTAAAGAAGCTGCAAAGAGGAATGATATCGGCTCTGCAAagAACTGTGTTCATTGCAAATTCATGATTTTGGATGCTTTTGCAGCAATTTCTCGTACTATAGGACATCTGTCAAAGAGTGCCGAGGTTATGAAGCTTGTTAATAACCTCATGAAGACTCCTGAAATGGCCGTGGCTATGCAAGAATTCAGCAAAGAAATGACAAAGGCAGGAGTTATTGAGGAGATAGTAAACGATGCTGTTGACTCGGCATTAGATTCCGAGGACATAGAAGATGAGATAGAAGAAGAAGTTGATAAAGTCTTAACAGCAATAGCTGGTGAGACAGCCACACAACTTCCTGAAGCTGTGAGGAAACAAAAGGTGAAGCAACCTGCTCAAAGAGTTGTAGCCGCGGATGAGGAAAAGGCTATAGCTGAGGGTGTCAATGATGAGGAAGAAATGGAAGAAATAAGGGCCAGACTTGCTAAAGTCAGATTCTACGATTCTGTTCATGCCACACCACCCAAATGCTACACAACAATGGTAGCTGCAGAAAAGAACGGCGAGCACGAGGGCCTCCTGCAGAGTGCCtaa 723 0.4205 MEKVMNILKPKPNSQEILRVWRRKLRQQSQNIDRQIRDIQREEKKVQKAIKEAAKRNDIGSAKNCVHCKFMILDAFAAISRTIGHLSKSAEVMKLVNNLMKTPEMAVAMQEFSKEMTKAGVIEEIVNDAVDSALDSEDIEDEIEEEVDKVLTAIAGETATQLPEAVRKQKVKQPAQRVVAADEEKAIAEGVNDEEEMEEIRARLAKVRFYDSVHATPPKCYTTMVAAEKNGEHEGLLQSA 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03659 240 Coils Coil 22 56 - -
Tsu02g03659 240 Gene3D - 72 165 - -
Tsu02g03659 240 Gene3D - 9 71 - -
Tsu02g03659 240 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 24 HOMOLOG 1-LIKE ISOFORM X1 3 66 - -
Tsu02g03659 240 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 24 HOMOLOG 1-LIKE ISOFORM X1 71 208 - -
Tsu02g03659 240 Pfam Snf7 81 167 IPR005024 GO:0007034
Tsu02g03659 240 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 3 66 IPR005024 GO:0007034
Tsu02g03659 240 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 71 208 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03659 Tsu-Chr2 41150081 41153101 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03659 K12193 - gmx:100781929 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03659 02 41150081 41153101 Tsu02g03659 02 41150081 41153101 ECH