Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03628 ATGAAATTGTGTGAAAATAtgaacaacaataataataataatcagaaTCAGGTTGGTGGTGGAAATGGAGAAGTGAATAATAAGATACTTTATATAGTTGTTATTGATGATGCTGAGAAGAAAACCACAGATAAAGGAAAAGAATCGTTTCGTTATACGCGTTCTGTTTTGCAGAGTACTCTGCAACTTATGGGATGCAAAGCTAGACACGCATTCAAgATCAGCAAAGGAGTATTCGAAAATACAAGGAGCGAGAGTTCTACTGATAATTTGAAGCCTGAGGCAGCAGTTTCATCAGGTCCCAACGCACTCAAGGGAAATGTTGTGCAAAAAGCAGACTTAGGAAACCAACCACTTCCAGGGAAACATAAAAGAACTAAGAGTATACCATTTGAGTTGTACAAAATGCGCACATCTGTATTTGTTCGAAGAGAAACATTTCTAGATATTGTGTGTGATGGTCTGGCTGAGTACAAGTATGTCGGTCCTAACCAGAGGGCAGACTTGATTCTAGCCTGCAGACTCCGGGAACGCAAGGAATCTGTTACTGTGCTGCTGTGTGGCACAAGTGGATGTGGCAAATCCACATTGTCTGCATTACTGGGTAGCAGATTGGGAATCACGACAGTGGTATCAACTGATTCTATCAGGCACATGATGAGAAGTTTTGCTAATGAGAAAGAAAACCCGCTGTTGTGGGCTTCTACTTACCATGCAGGCGAGTGTTTGGATCCTGTTGCTGTTGCTGAAGCAAAAgccaaaaagaaagcaaaaaagaTGGCTGGTGTGTCACAATCAATTACCAAGGATGAAGTAAACGATGGTCAAAGTTCTAGCAAATCTGATATACGGACATCAGAGATGGGATCTAGTGCTGCTGAGCGTCCAAGTCCAAAACAAATGGCTATTGAAGGATATAAGGCACAGAGTGAGATGGTGATTGACAGTCTTGATAGGCTAATCACTGCCTGGGAAGAACGGAAAGAGTCTGTTGTCGTCGAGGGTGTTCACCTGAGCCTCAACTTCGTCATGGGGCTCATGAAGAAACATCCGTCGATTATACCATTCATGATATACATTACAAATGAGGAGAAGCATTTGGAAAGATTTGCTGTGCGTGCGAAGTATATGACACTAGACCCAGCTAAAAACAAGTATGTGAAGTATATCCGAAACATCAGAACAATCCAGGATTATCTTTGTAAGCGTGCTGAAAAGCATTTAGTTCCCAAAATAAACAATACAAATGTTGACAAGAGTGTAGCCGCCATCCACGCAACCGTCTTCAGCTGCCTTAGAAGGCGTGAAATTGGGGAACAACTATATGATCCTGTTAGAAATACTGTCACAGTTATTTATGAGGAATACAGAAATCAATGTGCAGCCAATTCTTTGACCTCAAAAGGAATGTTTCAATTGATCAAGAGAAAAGGTTCTTCAAGGAGTCTGATGGCTCTAGTTAATGATGATGGTTCTGTGGCAAAGGCTTGGCCGGTCAATTTAGTTGATAGTAATGGGAAGCCCATATGGGGTGAAGGACCAGAGAATGGAATAGGACATCCAATGTATGGTCCCTTACGGATCAGTAAGGCAGAGCCTGTAAATCTTCAGTTTGGTTTTTATGGAATCAGTGCCTGGCCTACTGATGGTGGCACTAGTCGTGCGGGAAGTGTTGATGAATCCAGAGCTGGTGGAACTAGTCGTGCAGGAAGTGTTGATGAGTCCAGAGCTGATGGAACTGATACCGGTAGTAGATATGTATCCTCTTGCTGTAGCTCGCCTAGGATGTCAGATTGCCCCTCCAAGGAGCTTAAGGAAGACTTCTCAGTGCATGGTAGCGATGAAGAGATTGATGATCAACTAGATGTTGGCAGCGATGAGGATTTCAGTGACGACGGTGACAAAAGTGTCCATGATGAgGTTGGATCCGTTGATGAGGAATCAACAAAGTCTGATGAAGAGTACGACGATCTTGCAATGCAAGATGTAATGGAACACGGTTATTGGccagatgatgatgattacgAGCTTAGGAGTAAGCTTGTTGAAGAGCTTGGAGCTAAACTCCATGGAAATAAGTACCATCAAAACCTTGATCAATTCCTTAGAACTAGAAGTGAACCGGTGCCTCTAGAAATGGCATCTCAAGAACCATTTTGCTCTTATTCTTCTTTACTTGTTGAAAAGAGTGAGAGGAAAGTAATATCAAATGGAAAATCCAAATTCAGAAAACGTTCTCTTAGTATTCCTGCATTAGGAAAGCATAGTTCTGCTATCAATGATCCAATCCTTTCTGGTACTCCTCAAAGATCGGCACTGTTACAAGAGGTAAGGGTGAGATGTCCATCTATTTCTTTATGGGTTGAGTTTCTTTATGGTCAAGCAGCGATGTTGTACCTTGGGGATGAACATATTATGGCAACCACTGGAGTGCAACAAGGTGACCCGTTTGGACCACTCCTTTTCGCTCTTGTGCTACACCCTCTCATTCATAAAATCAGAGACAACTGCAACCTTCTTTTTCATGCCTGGTATCTTGATGGTGGGATTATCATAGGGGATTCAGAGTACGGTGCTGTGTTTTTCCCTTTTGTGTGTGCAGGCAGGAGGGTTTATGGTGTTTCGAAGGAGGAAGTGGCTAAATATCTTGATATCATTAGAGAGACGAGTCCAAGATTGGGTCTTCATTTGAATATTCGTAAAACGGAGATCTTTTGGCCTTCTTGTGATGGAAGAAAACTTCGTAAAGGGTTATTTCCTTCGGACATTGGAAGGCCGTTGTCTGGCGTGAAATTGCTCGAAGGTGCTGTTAGTCGAGATAGAGGTTTTATTGAGGAGGTAGCCATGAAGAGAGCTGTCAGGGCTGTTGAgttaatgcatcttcttcctaagCTAAGAGACCCACAAAGTGCTGTTAGTCGAGATAGAGGTTTTATTGAGGAGGTAGCCATGAAGAGAGCTGTCAGGGCTGTTGAgttaatgcatcttcttcctaagCTAAGAGACCCACAAAGAGTGTTGATCTTGGTTTGGGAGTTGTATAAATAG 3048 0.4124 MKLCENMNNNNNNNQNQVGGGNGEVNNKILYIVVIDDAEKKTTDKGKESFRYTRSVLQSTLQLMGCKARHAFKISKGVFENTRSESSTDNLKPEAAVSSGPNALKGNVVQKADLGNQPLPGKHKRTKSIPFELYKMRTSVFVRRETFLDIVCDGLAEYKYVGPNQRADLILACRLRERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVVSTDSIRHMMRSFANEKENPLLWASTYHAGECLDPVAVAEAKAKKKAKKMAGVSQSITKDEVNDGQSSSKSDIRTSEMGSSAAERPSPKQMAIEGYKAQSEMVIDSLDRLITAWEERKESVVVEGVHLSLNFVMGLMKKHPSIIPFMIYITNEEKHLERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCKRAEKHLVPKINNTNVDKSVAAIHATVFSCLRRREIGEQLYDPVRNTVTVIYEEYRNQCAANSLTSKGMFQLIKRKGSSRSLMALVNDDGSVAKAWPVNLVDSNGKPIWGEGPENGIGHPMYGPLRISKAEPVNLQFGFYGISAWPTDGGTSRAGSVDESRAGGTSRAGSVDESRADGTDTGSRYVSSCCSSPRMSDCPSKELKEDFSVHGSDEEIDDQLDVGSDEDFSDDGDKSVHDEVGSVDEESTKSDEEYDDLAMQDVMEHGYWPDDDDYELRSKLVEELGAKLHGNKYHQNLDQFLRTRSEPVPLEMASQEPFCSYSSLLVEKSERKVISNGKSKFRKRSLSIPALGKHSSAINDPILSGTPQRSALLQEVRVRCPSISLWVEFLYGQAAMLYLGDEHIMATTGVQQGDPFGPLLFALVLHPLIHKIRDNCNLLFHAWYLDGGIIIGDSEYGAVFFPFVCAGRRVYGVSKEEVAKYLDIIRETSPRLGLHLNIRKTEIFWPSCDGRKLRKGLFPSDIGRPLSGVKLLEGAVSRDRGFIEEVAMKRAVRAVELMHLLPKLRDPQSAVSRDRGFIEEVAMKRAVRAVELMHLLPKLRDPQRVLILVWELYK 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03628 1015 MobiDBLite consensus disorder prediction 260 300 - -
Tsu02g03628 1015 MobiDBLite consensus disorder prediction 581 596 - -
Tsu02g03628 1015 MobiDBLite consensus disorder prediction 549 652 - -
Tsu02g03628 1015 MobiDBLite consensus disorder prediction 630 645 - -
Tsu02g03628 1015 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 2 27 563 - -
Tsu02g03628 1015 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 2 564 768 - -
Tsu02g03628 1015 Gene3D - 183 428 IPR027417 -
Tsu02g03628 1015 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 434 IPR027417 -
Tsu02g03628 1015 MobiDBLite consensus disorder prediction 1 21 - -
Tsu02g03628 1015 MobiDBLite consensus disorder prediction 83 102 - -
Tsu02g03628 1015 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 780 905 IPR000477 -
Tsu02g03628 1015 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 27 563 - -
Tsu02g03628 1015 MobiDBLite consensus disorder prediction 599 618 - -
Tsu02g03628 1015 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 564 768 - -
Tsu02g03628 1015 MobiDBLite consensus disorder prediction 266 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03628 Tsu-Chr2 40763893 40775052 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03628 - - cam:101503547 1234.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03628 02 40763893 40775052 Tsu02g03628 02 40763893 40775052 ECH