Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03624 ATGATGTCCCACTCCTACCAGCACTCACAACCACAACAAAAACTGTTACTATCTCAATACAATCTGAACAAACTTGATGAACAAattatcaatattaatattCCTAAAAAGTCCCTCTCAACTTCTCAAACACTTCACAAACTCACCTCAACtgcaacaacaacatcaacacgCTCTAGCTTCTCTTTCTTTGACACCAAGCATtatgaaaatgaagaatttcATAGCCCTACATACCCTGCATTCCCCTGTTGTTTTAATATTCTTTCTAATTCTAAGCGATTCGTGTTTGGCTCAGTTTCTTCCATGGATCATACTCAACTAGATCATTTCTCATCACTTAATTCTCATTCTCAACATAATATTacaaaagagaaaattaacGGACTGcaaaagaaagaggaacttGAAAGAGAGGTCACTATGCTTCAAAGGTTGTTAGACCAAGAAAAAAAGGTTCATGAAATATTAGATATGGTGAATAGTAGACCAAATGGTTCAACTATATCTATTCCCAATTTTCTTCCTTCTAAGATGAGAGAATTGTTAGGAGAGCTAGCCATGGTTGAGGGTGAGATAGCAAGACTTGAATCTCAAATTAGCACACTTCAAGCTGGTTTGAAACATGAACAAGAAATCACAAAAGAATCCAAGTCAAAAACATGGAACCAAGGGAATTTGATTAGCAATTCTAACTACAATCATTTAACAACTTCAACAATTCCAAATCCTAGTTTTGTTCAAAGAAGTAATAGTAATGTTCATGAAAGGATGGCATTTGACACCAAGGCATTGCATTTCATAAGTAAAGCCATCAAGGGTGATTATAATCTTAATGACTTTAGTCTTAATGAGAAAACAGGATTTCCTAAAATTTCTGTTGAgcagaaagaaaataattttcaagAAGATGTGAAATTTCATGAAAGAGTTACAAGGAAAAATGGAGCAGTTAAGCCTCCCTCGCCTATGCGAGACCCGCGCCATCCATCACCTAAGCTGCGCGAACGTAATCTAGACATGTACCTAGATCTCCCAACAAGATCATTACTTGATCCACTTCTATCAGAAGAGAATGACCTAAACTGGCAACCAAACAAGCTATCAGAAAGCATCATGAAATGTTTGAATTTCATTTATGTAAGACTACTCAGAACATCAAGAGCAACCGAATTAGAAAAATCAGGACCAGTTTCAAGGTCTTTGCATTCTTCTTTAAGCTCAAGAAGTTTCAGGGTCGATATAGGATCAACCCCGAAACCAAGTCTTATGTTGCATAAAGAATCTAGGCAACAAGATCCATATGGTATTTTTAATACAGAAGAGTCTATTCCAAGGGATATTGGTCCTTATAAGAATTTGGTCATGTTCACATCAAGTTCTATGGATCCAAAGTTCATCTCAAGTCCTTCCTCTATTCCATTACTAAGAAAGTTAAGGATCTTGATGAGCAATCTTCAAACAGTTGATTTGAAAGGCCTAACAAATCAACAGAAATTAGCATTTTGGATCAACTTGTACAATGCTTGTATCATGCATGGATTTATTCAATATGGAGTGCCATCCACTCCAGAAAAGTTAGTTGCATTGATGAACAAGGCAACCCTCAACATAGGTGGCAACATAATAAATGCTCAAGCAATAGAGcattttattttaaggaaaagAGACACTTCTAACATGAAAGAGGCACAAAGGAAGGGGGAGTGGGAAGAGAAAGAATCAGTTGTCCGTGAGCTATATGGGCTTGAATTTGTGGATCCAAATGTAACATTTGCTCTTTGTAATGGAACTCGTTCTTCTCCAGCAGTAAGGATATACACAGGTGATGGTGTAACATCTGAATTAGAGAAATCAAAGCTAGATTaccttcaagcttcaattcTAGCTACTAGCAACAAAAGGATAGGGTTTCCAGAACTCCTCCTCAGAAACATGCTTGATTTTGCTATGGATATTGATTCACTAGTGGATTGGGTGTGTAACCAGTTACCTACTTCAGGAACTCTAAGGAAATCAATGGTTGAATGCTTCAGAGGTCATGGTGGTGGTGGTTCCATGAAGAACAAAGATGCATATGAGGCTAAAGATCTTGCGGATGCCATGACACAAAATGAATATCGAGTTCTCAATGACCATGGAGCCAAGAAAAAACCCGGTGTGCTTGAGACACTCAAACCGCCTTACCTGCCCAATCAATCAGACTTATGA 2211 0.355 MMSHSYQHSQPQQKLLLSQYNLNKLDEQIININIPKKSLSTSQTLHKLTSTATTTSTRSSFSFFDTKHYENEEFHSPTYPAFPCCFNILSNSKRFVFGSVSSMDHTQLDHFSSLNSHSQHNITKEKINGLQKKEELEREVTMLQRLLDQEKKVHEILDMVNSRPNGSTISIPNFLPSKMRELLGELAMVEGEIARLESQISTLQAGLKHEQEITKESKSKTWNQGNLISNSNYNHLTTSTIPNPSFVQRSNSNVHERMAFDTKALHFISKAIKGDYNLNDFSLNEKTGFPKISVEQKENNFQEDVKFHERVTRKNGAVKPPSPMRDPRHPSPKLRERNLDMYLDLPTRSLLDPLLSEENDLNWQPNKLSESIMKCLNFIYVRLLRTSRATELEKSGPVSRSLHSSLSSRSFRVDIGSTPKPSLMLHKESRQQDPYGIFNTEESIPRDIGPYKNLVMFTSSSMDPKFISSPSSIPLLRKLRILMSNLQTVDLKGLTNQQKLAFWINLYNACIMHGFIQYGVPSTPEKLVALMNKATLNIGGNIINAQAIEHFILRKRDTSNMKEAQRKGEWEEKESVVRELYGLEFVDPNVTFALCNGTRSSPAVRIYTGDGVTSELEKSKLDYLQASILATSNKRIGFPELLLRNMLDFAMDIDSLVDWVCNQLPTSGTLRKSMVECFRGHGGGGSMKNKDAYEAKDLADAMTQNEYRVLNDHGAKKKPGVLETLKPPYLPNQSDL 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03624 736 Coils Coil 179 206 - -
Tsu02g03624 736 Pfam Leucine-zipper of ternary complex factor MIP1 131 210 IPR025757 -
Tsu02g03624 736 MobiDBLite consensus disorder prediction 315 334 - -
Tsu02g03624 736 PANTHER TRANSPORTER, PUTATIVE-RELATED 111 683 - -
Tsu02g03624 736 Pfam Protein of unknown function, DUF547 492 624 IPR006869 -
Tsu02g03624 736 PANTHER EXPRESSED PROTEIN 111 683 - -
Tsu02g03624 736 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03624 Tsu-Chr2 40709828 40722895 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03624 - - gmx:100809848 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03624 02 40709828 40722895 Tsu02g03624 02 40709828 40722895 ECH