Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03613 ATGGCttccaaaaatattttccatTTCACTTCACTAGCTTTGCTTCTCATATTTGGTTTCTTGTCTTTCAAGGCAAATGCTCGCACTCTTGAAGATGTTTCAATGCTTGTGAGACATGAGAAATGGATGGCACAACATGGAAAAGTCTACAAGGACTCAAAAGAGAAGGCGTTGCGATTTCAAATCTTCAAAGAAAACGTTAAATTCATAGAAGAATTTAACAATGCCGGAAACAAATCTTACAAGCTAGGAGTTAACCATTTTGCTGATCTCACAAATGAAGAATATAATTCTAGAAATAAGTTCATGGGTCATATGTATTCTAATAGAGCAAGGACATCCACATTTAAGTATCAAGATGCGACGAATGTGCCTGCTTCTATAGATTGGAGACAGAAAGGAGCTGTGACACCGGTTAAGAATCAAGGCGACACATGTGGGAGTTGTTGGGCGTTTTCTGCCGTGGCAGCAATGGAAGGGATCACAAAGTTGAGTACCGGAAAATTGATTTCTTTATCAGAACAAGAGCTTATTGATTGCGATAAAATAGACCAAGGTTGTAAAGGCGGTCAAATGAACAATGCCTTTGAATTTATCATGGAAAACAAAGGACTTAGCTCAGATGACATTTATCCATATCATGGTAAGGGTGAAATGTGCAATGTAGATGCAGAAAGCAACCCTTCAGCTAGCATTAAGGGATATCAAAATGTACCTGCCAACAGTGAGACTGCATTGCTCAACGCGGTTGCTAATCAACCAGTTTCTGTTGCTATTGATGCTAGCGGATCTGAGTTTCGATTTTATTCGAGTGGTATTTTTACCGGAACATGTGGTAATAATTTAAATCACGCCGCTACTGCCGTTGGTTATGGAGTAAGTGAAGATGGAACTAAATATTGGTTGGTAAAAAATTCATATGGAACACAATGGGGTGAAGAAGGATATTTAAGGATGAAGAGAGATTTTGTTGCCCCAGAAGGCTTGTGTGGTATAGCAATGCGTGCTTCTTTTCCTTATGTATAA 1026 0.384 MASKNIFHFTSLALLLIFGFLSFKANARTLEDVSMLVRHEKWMAQHGKVYKDSKEKALRFQIFKENVKFIEEFNNAGNKSYKLGVNHFADLTNEEYNSRNKFMGHMYSNRARTSTFKYQDATNVPASIDWRQKGAVTPVKNQGDTCGSCWAFSAVAAMEGITKLSTGKLISLSEQELIDCDKIDQGCKGGQMNNAFEFIMENKGLSSDDIYPYHGKGEMCNVDAESNPSASIKGYQNVPANSETALLNAVANQPVSVAIDASGSEFRFYSSGIFTGTCGNNLNHAATAVGYGVSEDGTKYWLVKNSYGTQWGEEGYLRMKRDFVAPEGLCGIAMRASFPYV 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03613 341 SMART Inhibitor_I29_2 39 96 IPR013201 -
Tsu02g03613 341 Pfam Cathepsin propeptide inhibitor domain (I29) 39 96 IPR013201 -
Tsu02g03613 341 SMART pept_c1 124 340 IPR000668 GO:0006508|GO:0008234
Tsu02g03613 341 SUPERFAMILY Cysteine proteinases 32 340 IPR038765 -
Tsu02g03613 341 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 23 340 - -
Tsu02g03613 341 PRINTS Papain cysteine protease (C1) family signature 284 294 IPR000668 GO:0006508|GO:0008234
Tsu02g03613 341 PRINTS Papain cysteine protease (C1) family signature 143 158 IPR000668 GO:0006508|GO:0008234
Tsu02g03613 341 PRINTS Papain cysteine protease (C1) family signature 300 306 IPR000668 GO:0006508|GO:0008234
Tsu02g03613 341 PANTHER - 23 340 - -
Tsu02g03613 341 CDD Peptidase_C1A 125 339 IPR039417 -
Tsu02g03613 341 Pfam Papain family cysteine protease 124 339 IPR000668 GO:0006508|GO:0008234
Tsu02g03613 341 Gene3D Cysteine proteinases 22 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03613 Tsu-Chr2 40575890 40577204 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03613 - - gmx:100816790 478.018