Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03612 ATGGCCGCTAAAAGTGGAATGACTCCGGCGACATACTCGCCGTCTCCGACAACCGGTAAAAAGAAACCGTCAAATTTAAAGGAAGATTGGATCCGACCTGATGGTCGTAGCTTCCACCAGTGTAGACCCGCATTTTTCAGGACTGGTGCTGTGAATGCTGCATCAGGATCAGCTTATGCTGAGTTTGGAAATACCAAGGTCATTGTATCTGTGTTTGGGCCAAGAGAGAGCAAGAAGGCAATGATGTATAGTGATACGGGGCGGCTGAATTGCAATGTCAGCTATACAACATTTTCAACTCCGGTTCGTGGACAGGGTTCAGACCACAAAGAGTACAGTTCGATGCTTCAGAAAGCTTTAGAGGGTGCAATAATATTGGAAAGTTTCCCCAAGACCACTGTGGATGTGTTTGCATTGGTGCTGGAATCTAGTGGAAGTGATCTCCCAGTTGTCATATCAGTTGCTAGTCTTGCCTTGGCAGACGCTGGAATACTGATGTATGACCTTGTTGCCTCAGTTTCTGTGTCATGTCTCGGTAAGAGCCTCGTCATTGATCCTATTTCGGAGGAGGAAAACTGCCAAGATGGAAGCTTAATGATGACATGCATGCCTTCTCGCTATGAAATTACCCAATTGACAGTTACTGGTGAATGGTCTGCCGCAAAGATTAATGAGGGGATGCAGCTGTGCTTGGATGCTTGTAAAAAGCTTGCAAAGATTATGAGGTCATGTTTGAAAGAATCCGCTTCTGATGCCCAGGGTTTGGAGAATGAGACTTCTTAG 783 0.4585 MAAKSGMTPATYSPSPTTGKKKPSNLKEDWIRPDGRSFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDTGRLNCNVSYTTFSTPVRGQGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVASVSVSCLGKSLVIDPISEEENCQDGSLMMTCMPSRYEITQLTVTGEWSAAKINEGMQLCLDACKKLAKIMRSCLKESASDAQGLENETS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03612 260 Pfam 3' exoribonuclease family, domain 1 40 164 IPR001247 -
Tsu02g03612 260 Gene3D - 20 254 IPR027408 -
Tsu02g03612 260 Pfam 3' exoribonuclease family, domain 2 168 229 IPR015847 -
Tsu02g03612 260 PANTHER EXOSOME COMPLEX COMPONENT 11 249 - -
Tsu02g03612 260 CDD RNase_PH_MTR3 41 247 - -
Tsu02g03612 260 PANTHER EXOSOME COMPLEX COMPONENT MTR3 11 249 - -
Tsu02g03612 260 MobiDBLite consensus disorder prediction 1 33 - -
Tsu02g03612 260 SUPERFAMILY Ribosomal protein S5 domain 2-like 26 195 IPR020568 -
Tsu02g03612 260 SUPERFAMILY Ribonuclease PH domain 2-like 166 250 IPR036345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03612 Tsu-Chr2 40570975 40575018 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03612 K12587 - gmx:100816271 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03612 02 40570975 40575018 Tsu02g03612 02 40570975 40575018 ECH