Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03609 ATGGGGTTGGTTTCTCAAGCTGTTTATGATGGAGGTCGACATGTGATTGGGGTTATTCCAAGGACACTTATTGCAAGAGAGATAACTGGAGAGACAGTAGGAGAAGTGAAGGCAGTAGCAGACATGCATCAAAGAAAAGCTGAAATGGCTAAGCATTCTGATGCTTTTATTGCCTTACCTGGTGGCTATGGGACACTTGAGGAGCTTCTTGAGGTCATAACTTGGGCTCAACTTGGCATCCATGATAAACCAGTGGGGTTATTGAATGTAGACGGCTTCTACAATTCTTTGTTGTCTTTCATTGACAAAGCTGTGGAGGAAGGTTTCATTAGCCCAAAAGCTCGTCATATAATTGTATCTGCCCCATCAACAAAAGAGCTTCTCAAAAAGATGGAGGAATATTCCCCACAACATGAAAGAGTTGCATCTAAGCAAAGTTGGGAAAATGGGCAACTGGATTAG 462 0.4264 MGLVSQAVYDGGRHVIGVIPRTLIAREITGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGFYNSLLSFIDKAVEEGFISPKARHIIVSAPSTKELLKKMEEYSPQHERVASKQSWENGQLD 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03609 153 TIGRFAM TIGR00730: TIGR00730 family protein 1 134 IPR005269 GO:0009691|GO:0016787
Tsu02g03609 153 MobiDBLite consensus disorder prediction 134 153 - -
Tsu02g03609 153 Pfam Possible lysine decarboxylase 1 131 IPR031100 -
Tsu02g03609 153 PANTHER LOG FAMILY PROTEIN YJL055W 1 153 - -
Tsu02g03609 153 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG1 1 153 - -
Tsu02g03609 153 Gene3D - 1 150 - -
Tsu02g03609 153 SUPERFAMILY MCP/YpsA-like 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03609 Tsu-Chr2 40547172 40552783 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03609 K22522 - gmx:100815735 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03609 02 40547172 40552783 Tsu02g03609 02 40547172 40552783 ECH
Tsu02g05095 02 59992237 59996234 Tsu02g03609 02 40547172 40552783 PCT