Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03608 ATGAGTTTTAGTCGAAATTCGACATCGAGAAGTGGAGATTCCTTGGAAGGAATGTTGAACGACTATGTCGCTGGAAAGACGAAACCGAAACCTCTAAAATCTGGCTCTACAAAATTTGTTGCAGCTTTAACAtgtcttcaatttttctttgcaaTATATGCAACATTTTTATTGTACTACATGGGTCCTTCAATTGATTTAAGAACCAAACCAGATTTCTCGAGAATTGCGCAACAATGGAAACAACTCATGATCACACCACACATTGTAGGACATTACCAAGATTCTGCTTCTTCACTCATTCAAGAAACAAATCCATCACTTGTTTGTGAGAATGAGAAGATAGATTTCTTGCAAAAGAAGTCAAATGATGTTCAAATGATCAAGATAAAAAGAGATCTTTATGAAGAGGTTTTGAATTTCCAAAACAAAACCATTGGAACTGAAAATCTTCAAGAgctaatgaaaatgaaatccaAATGGGATTTAAATGttccaaatccaacaaaaccaaaaatcaatgTTTTGTTAAACCATTTCAAGAGAAAAACACTTTGTGCTCAACTTGATTCTTTACTTCAACAAACACTTCCTTTTCATCAAGTTTGGGTGCTTTCATTCGGAAGTCCAAACGAAGCCTCCCTCAAGAGAATCGTCGAAAGCTATAACGATTCAAGAATCAGTTTCATTAGCTCGAGTTACGATTTTAAGTACTATGGAAGGTTTCAAATGGCTTTACAAACAGAAGCTGATTTGGTTTATATAGTTGATGATGATATGATACCTGGAAGAAAAATGTTGGAGATTTTGGCACATGTTTCTGGGACTGAAAAGTATAAGAATTCTGTTTTGGGAAGTATTGGGAGAATATTGCCATTTAGACAGAAAGATTTTACTTTTCCAAGTTATAGGAAATTTAAGTCTAAAGAAGCTGGATTATATTTGCCTGATCCTGCTTATGATATCACTATTGATAAAATTGTGCAGGTTGATTTTCTTTCAAGTTCTTGGTTTTTATCTGCTGAACTTGTTAAGACACTTTTCATTGAGACTCCTTTTACTTTCTCTACTGGTGAAGATCTACACCTCAGTTATCAGCTACAAAAGTATAGAAATGCAGGGTCATTTGTTCTACCAGTAGATCCAAATGACAAAGAAACATGGGGTGATAGTGAACACAGACTAGCATATGTATCAGAAACAACAGTAATTTTCAAAGACATAGTTCAAGTCCGCGATGATCAATGGTGGAAAGCACTTTCATCAGGTTACATAACTCAATGGGCAGCAATGTACCCTCAAAAAGTTGATGCACTATTCTATGCTCATTCAGTTGATGAAGTAAAAGCACTTTCACCACTTCTTGAAAAATTCAGATCAACAGTTGGTAAAAAAGCATACATTGTTGTTTCTGGTGGAAACTTTTGTCCTTGTGAAAAAGCTGCAGAAGCACTTAAATGGCCTTTGGTTGTTTGCAAAGAAAGAAGGTTTAAGATATTTGATTTGGGTGTTGGTTCAATTTCTGGTGTGTCAAATTCTGAAGCACCAGTTATACAAGCTGTGTATTCAAGTTTGAAAGGTTTGATTAAAATTCATAATCCAAGTGTTGTTATTACTGTGGATGATATTGATGTTAATgttagaaaggctttgaaaatGGCTTCTGAAACTAATTCAAATGGTACTACTTTGGTTCTTTTGCCAAGAGCTTCTGTTTCTAAAGTTCTTTGGATGGCTGATTTGAGATCAACAGCATTGCCAAattggaacaaaatgagacTATCCATCAACATCATAACTCAAAACAGGGTAAATTCACTATCAAGGCTTCTAAGATCACTCACAGATGCATACTATCTAGGAGATGAAATTCCAATCACATTCAACATGGATAGTAAAGTTGATGAATCAACAATAAAACTAGTTTCTTCATTTGATTGGCCACATGGACCAAAAACATTAAGAAGAAGAATAATCCAAGGTGGACTAATAAGAGCAGTTAGTGAAAGTTGGTATCCATCATCAGATGATAACTTTGGTTTACTCTTAGAAGATGACATTGAAGTTTCACCATATTACTATCTATGGATCAAATATGCACTCATGAATTACCATTATGACCCTCAAGTTTCTCTCCCTGAACTCTCTTCAATCTCTCTATACACACCAAGAATAGTTGAAGTTGTTAAAGAAAGACCAAAATGGAATGCAACACAATTCTTCAAACAAATTCATCCAAACACACCTTATCTTCATCAATTACCATGTAGTTGGGGAGCAGTGTTTTTCCCTAAACATTGGAGAGAGTTTTATGTTTACATGAACATGAGGTTCACCGAAGATCCTAAGAAAAACCCGGTTCAAATACCGAAATCAAGAACAAATGGTTGGCAAGCTTCATGGAAAAAATTTCTTATTGATATGATGTATTTAAGAGGGTATGTTAGTCTTTATCCAAATTTTCCAAACCAAGCTAGCTTTTCAACTAATCATATGGAACCAGGTGCACATATTAGTGCTAAAGATAATGTGGTTAAGCATaataaaatggattttgaagtGCCATTATTGAAAGAtgattttagaaattttttacCTGGAATGAAAATGCCTTCAGCTTCAAGATTACCATCTTTGAATCTTTTTAATCAAGCTGTTTCTCTTAAGGGACTTAAATCTGCTGGTGCTAAGTTGGGACAAGATGTTCTTAGATGTGATAATGTTACTGAgattgttgctgttgatcatcAGACTGGTTTACCAAATCACTGCTACAAATTCTGA 2784 0.3294 MSFSRNSTSRSGDSLEGMLNDYVAGKTKPKPLKSGSTKFVAALTCLQFFFAIYATFLLYYMGPSIDLRTKPDFSRIAQQWKQLMITPHIVGHYQDSASSLIQETNPSLVCENEKIDFLQKKSNDVQMIKIKRDLYEEVLNFQNKTIGTENLQELMKMKSKWDLNVPNPTKPKINVLLNHFKRKTLCAQLDSLLQQTLPFHQVWVLSFGSPNEASLKRIVESYNDSRISFISSSYDFKYYGRFQMALQTEADLVYIVDDDMIPGRKMLEILAHVSGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFKSKEAGLYLPDPAYDITIDKIVQVDFLSSSWFLSAELVKTLFIETPFTFSTGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSSGYITQWAAMYPQKVDALFYAHSVDEVKALSPLLEKFRSTVGKKAYIVVSGGNFCPCEKAAEALKWPLVVCKERRFKIFDLGVGSISGVSNSEAPVIQAVYSSLKGLIKIHNPSVVITVDDIDVNVRKALKMASETNSNGTTLVLLPRASVSKVLWMADLRSTALPNWNKMRLSINIITQNRVNSLSRLLRSLTDAYYLGDEIPITFNMDSKVDESTIKLVSSFDWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDNFGLLLEDDIEVSPYYYLWIKYALMNYHYDPQVSLPELSSISLYTPRIVEVVKERPKWNATQFFKQIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTEDPKKNPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPNQASFSTNHMEPGAHISAKDNVVKHNKMDFEVPLLKDDFRNFLPGMKMPSASRLPSLNLFNQAVSLKGLKSAGAKLGQDVLRCDNVTEIVAVDHQTGLPNHCYKF 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03608 927 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 594 842 IPR029044 -
Tsu02g03608 927 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 113 380 IPR029044 -
Tsu02g03608 927 CDD Glyco_tranf_GTA_type 183 273 - -
Tsu02g03608 927 SUPERFAMILY Nucleotide-diphospho-sugar transferases 591 782 IPR029044 -
Tsu02g03608 927 PANTHER OSJNBA0004B13.7 PROTEIN 27 927 - -
Tsu02g03608 927 PANTHER - 27 927 - -
Tsu02g03608 927 SUPERFAMILY Nucleotide-diphospho-sugar transferases 167 370 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03608 Tsu-Chr2 40534636 40539397 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03608 - - gmx:100790938 1654.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03608 02 40534636 40539397 Tsu02g03608 02 40534636 40539397 ECH