Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03574 ATGGCTTGGAGTATGGATAGTGGTGACTTGGGTCTTGAAGTCAAAATTGGGGTTGTTCATCCTGCAACAGATGCTTATGCTGCAGAGGCAGTTGAAGCTTTGAAAGCTGGGAAGGTCATTGCAGTTCCGACTGATACATTATATGGATTTGCTTGCGATGCATGCTCATTGGAAGCAGTTAACAGGATTTATGAGATTAAAGGCCGTAAACATACTAGTCCGTTGGCTATTTGTGTTGGTGACGTATCAGACATAGATCGTTTCGCCGTCACTGATCATTTACCTCATGGCCTGCTTGATTCCCTACTACCAGGGCCTGTTACAGTTGTACTAAGACGAGGAGAGTCGAGTGCTCTTGAACGATCTTTGAACCCGGGATTTGATAGTATAGGAGTTAGAGTGCCTGATTGCAATTTCATTAGGCTCATTGCCCGCGGTTCGGGAACGGCGTTGGCCCTTACTAGTGCAAACCTAAGTGGACAACCAAGTAGTGTTTGCAtcaaagattttgaaaaactatggGAACATTGTGCTTCTGTTTATGATGGTGGTACGCTTCCATCTGGTCGTGCAGGTTCAACCGTTGTGGATCTCACTACACCATACAAATATAAGATTCTTAGGCCTGGAAGTGCGAAGGAGGAGACAGTTGCCATCTTGGAGAAGCATTCGTTTGTTGAGACAGCGTTAAGTTAG 696 0.4425 MAWSMDSGDLGLEVKIGVVHPATDAYAAEAVEALKAGKVIAVPTDTLYGFACDACSLEAVNRIYEIKGRKHTSPLAICVGDVSDIDRFAVTDHLPHGLLDSLLPGPVTVVLRRGESSALERSLNPGFDSIGVRVPDCNFIRLIARGSGTALALTSANLSGQPSSVCIKDFEKLWEHCASVYDGGTLPSGRAGSTVVDLTTPYKYKILRPGSAKEETVAILEKHSFVETALS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03574 231 PANTHER SUA5 3 229 - -
Tsu02g03574 231 ProSiteProfiles YrdC-like domain profile. 24 212 IPR006070 GO:0003725
Tsu02g03574 231 PANTHER YRDC DOMAIN-CONTAINING PROTEIN, MITOCHONDRIAL 3 229 - -
Tsu02g03574 231 SUPERFAMILY YrdC/RibB 27 216 IPR017945 -
Tsu02g03574 231 Gene3D DHBP synthase 15 223 - -
Tsu02g03574 231 TIGRFAM TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 27 217 IPR006070 GO:0003725
Tsu02g03574 231 Pfam Telomere recombination 32 210 IPR006070 GO:0003725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03574 K07566 - mtr:MTR_4g459430 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03574 02 40164365 40168848 Tsu02g03574 02 40164365 40168848 ECH