Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03570 ATGGCTGGAAGAAAATGGAGCATCTTGGTGGCCTTAGTTATCTTACTTATCTCTATGGAAGCTGTCATTGCTCAAGGACAAGGAAATGGTAATGGCAATGGAAACAATGGTAACGGTAATGGTAATAATAACGGTAACAATGGGAACAGTAAGGGAAATGATAAGGAAGAAGggaagaaggagaaggagaaaaaggagaagaaggagaaagttccgaaaaagaagaagagtaCGAAAGAGGAATCGTCAAATTATCAACAGTTGCCAACTCTGCCAACAGGACAGGAGCGAGCGTTCTGTAAAGCAAACAATGCTTGTAATTTCGCCACTCTTGTGTGTCCAGCTGAGTGCCAGACCAGGAAGccaaagaagaacaagaaggCGAAAGGTTGTTTCATTGACTGCAGCAGCAAATGTGAAGCCACTTGCAAGTTTAGAAGAGCAAACTGTGACGGCTATGGTTCATTGTGCTACGATCCTCGCTTTGTTGGTGGAGACGGTGTGATGTTCTATTTCCACGGAGCCAAAGGAGGAAACTTTGCCATAGTTTCAGATGACGAATTCCAAATCAACGCACACTTCATCGGTACTCGTCCTCAAGGAAGGACTCGCGACTACACATGGGTGCAAGCACTTTCTGTCATGTTCGACACACACACTCTTGTTATTGCAGCCAATAGAGTAACTCAATGGAATGACAATGTTGACTCTCTTACTGTAAAATGGGATGGTGAATCAGTAACCATTCCTACTGACGGTGACGCAGAATGGAAGATTACTACTGATGAAAGAGAAGTGGTTGTGGAGAGAACAGATGATACAAACAGTGTTAGAGTCACAGTTTCTGGTTTGCTTGAAATGGACATAAGGGTAAGACCTAttggagaaaaagaaaacaaagctCACAATTACCAATTGCCATCAGATGATGCTTTTGCTCATTTGGAGACACAGTTCAAGTTTAAGAAACCTACAGATTCTATTGAAGGAGTTTTAGGTCAAACTTATAGGCCAAGTTATGTTAGTCCTGTTAAGAGAGGTGTTGCTATGCCAATGATGGGAGGAGAAGACAAATACCAAACTTCATCGCTCTTTTCAACATCCTGCAAACTATGCAGGTTCCAAAGGCCTTCTACTAGCCAAGGACTAATTGCTCAATACTGA 1164 0.39 MAGRKWSILVALVILLISMEAVIAQGQGNGNGNGNNGNGNGNNNGNNGNSKGNDKEEGKKEKEKKEKKEKVPKKKKSTKEESSNYQQLPTLPTGQERAFCKANNACNFATLVCPAECQTRKPKKNKKAKGCFIDCSSKCEATCKFRRANCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDEFQINAHFIGTRPQGRTRDYTWVQALSVMFDTHTLVIAANRVTQWNDNVDSLTVKWDGESVTIPTDGDAEWKITTDEREVVVERTDDTNSVRVTVSGLLEMDIRVRPIGEKENKAHNYQLPSDDAFAHLETQFKFKKPTDSIEGVLGQTYRPSYVSPVKRGVAMPMMGGEDKYQTSSLFSTSCKLCRFQRPSTSQGLIAQY 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03570 387 MobiDBLite consensus disorder prediction 52 81 - -
Tsu02g03570 387 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 1 383 - -
Tsu02g03570 387 MobiDBLite consensus disorder prediction 32 51 - -
Tsu02g03570 387 PANTHER ROOT CAP/LATE EMBRYOGENESIS-LIKE PROTEIN 1 383 - -
Tsu02g03570 387 MobiDBLite consensus disorder prediction 32 89 - -
Tsu02g03570 387 Pfam Root cap 318 374 IPR009646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03570 Tsu-Chr2 40121427 40122829 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03570 - - lja:Lj3g3v3086010.1 546.584