Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03569 ATGAGAGTGACACAAATTGTGTTgggtttggtttggtttctTGGTGTTTATGTACTTGCTTCTTTTTGTTCCAATGTTACCTATGATCATAGAGCATTGGTCATTGATGGCAAACGCAGGGTCTTAATATCTGGTTCTATTCATTACCCTCGTAGCACTCCACagATGTGGCCAGACCTTATTCAGAAATCCAAAGATGGAGGAATTGATGTGATTGAGACTTATGTTTTTTGGAACTTACATGAACCGGTTCGAGGCCAGTATAATTTTGAAGGGAGGGGAGATTTAGTTGGATTTGTGAAAGCAGTAGCAGCAGCAGGTCTATATGTTCATCTTCGGATCGGTCCATACGCGTGTGCGGAATGGAATTACGGTGGTTTCCCTCTTTGGTTGCATTTTATTCCTGGAATTAAGTTCAGAACTGATAATAAACCATTCGAGGCAGAAATGAAGCGGTTTACCGCGAAGATTGTGGATTTAATGAAGCAAGAGAATCTCTATGCATCACAAGGAGGACCAATTATTTTATCTCAGATTGAAAATGAGTATGGAAACGTCGATTCACACTATGGTCCTGCCGCTAAACCCTACATCAATTGGGCAGCATCAATGGCTACATCTCTTGATACAGGTGTTCCTTGGGTTATGTGCCAGCAGGCAAATGCACCTGATCCAATTATAAACACATGCAATGGATTTTACTGCGATCAATTCACACCAAACTCTAACAACAAACCAAAAATGTGGACCGAGAATTGGAGTGGATGGTTTCTTGCATTTGGAGGTGCTGTGCCTTATAGACCTGTGGAAGATCTTGCATTTGCTGTTGCACGTTTTTTTCAACGGGGTGGAACTTTTCAAAATTACTACATGTACCATGGAGGGACTAACTTTGGTCGTACAACCGGTGGACCTTTCATTTCTACAAGTTATGATTATGATGCACCCATTGACGAGTATGGAATTATTAGACAGCCCAAATGGGGCCATCTTAAAGATTTGCACAAAGCCATAAAGCTTTGTGAAGAAGCACTGGTAGCTACTGATCCAACAATTTCATCTCCTGGTCCAAATCTAGAGACTGCAGTTTACAAGACAGGAAATGTATGCGCCGCCGCCTTCCTTGCCAACACTGGCACGTCTGATGCAACAGTAACCTTTAATGGAAATTCATATCACTTGCCTGGATGGTCTGTGAGCATCTTACCAGACTGCAAGAATGTTGTACTCAATACTGCAAAGATTAATTCTGCATCTATGATTTCAAGCTTCGCAACTGAATCTTTAAAAGAAGAGGTTGATTCTTTGGACGGTTCAAGTTCAGGATGGAGTTGGATTAGTGAACCGGTTGGTATTTCAAAGGCTGATGCATTCTCAAAACCTGGACTACTCGAGCAAATAAATACGACAGCTGATAGAAGTGACTACTTGTGGTACTCATTAAGctttgttgttgaAGATAATGCCGCTGATCAATATGTACTTCACATTGAATCCCTTGGTCACGCCCTTCatgcttttataaatatgaaacttgcagGGAGTAAGGCAGGCAACAGCGGAAACGCTAAGGTCAATGTGGACATCCCTATTACAATTGTAGCTGGAAAGAACACGATCGATCTCCTGAGTTTAACAGTGGGATTACAGAACTATGGAGCTTTTTATGACACGGTTGGTGCGGGGATCACTGGTCCGGTAACATTGAAATTTCCGAAAAATGGAAGTACCGCTGATCTCTCGTCACAGCAGTGGACATATCAGGTTGGCCTTCAAGGTGAAGATTTAGGTTTGTCTAGTGGAAGCGTTGGACAGTGGAATTCACAATCCACCTTACCTACAAATCAGCCTTTGACTTGGTACAAGACAAACTTTGTTGCTCCCTCCGGCAGTAACCCGGTTGCAATTGACTTCACGGGGATGGGAAAAGGTGAAGCTTGGGTGAATGGACAGAGCATCGGTCGATATTGGCCAACATATGTCGCACCAAATTCCGGTTGTACCGACTCATGCAATTATAGAGGCGGCTATTCTGCATCCAAATGTCTTAAGAACTGTGGAAAACCATCACAGACATTATATCATGTACCGCGATCATGGTTGAAACCAGACAGCAACACTCTTGTATTGTTTGAGGAAAGCGGAGGTGACCCAACAAAAATATCTTTCGCTACAAAACAAATAGAAAGTGTTTGTTCACATGTATCCGAATCTCACCCTCCACCTGTAGAAACGTGGAATTCGGATACAGATTCAGGAAGAAAGGTAGGTCCTGTACTGTCACTGGAATGCCCTTATCCTAATCAGGTGATCTCTTCCATTAAATTTGCAAGCTTTGGAACACCTCTTGGAACTTGCGGAAACTTCAACCAAGGACAATGCAGTAGCAATAGGGCTCTATCCATTGTGCAGAAGGCCTGCATTGGATCAAGCAGTTGTAGCATTGGAGTATCAATTAATACATTTGGAAATCCATGTAGAGGAGTAACAAAGAGTTTAGCTGTTGAAGCTGCTTGTACATAG 2523 0.417 MRVTQIVLGLVWFLGVYVLASFCSNVTYDHRALVIDGKRRVLISGSIHYPRSTPQMWPDLIQKSKDGGIDVIETYVFWNLHEPVRGQYNFEGRGDLVGFVKAVAAAGLYVHLRIGPYACAEWNYGGFPLWLHFIPGIKFRTDNKPFEAEMKRFTAKIVDLMKQENLYASQGGPIILSQIENEYGNVDSHYGPAAKPYINWAASMATSLDTGVPWVMCQQANAPDPIINTCNGFYCDQFTPNSNNKPKMWTENWSGWFLAFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFGRTTGGPFISTSYDYDAPIDEYGIIRQPKWGHLKDLHKAIKLCEEALVATDPTISSPGPNLETAVYKTGNVCAAAFLANTGTSDATVTFNGNSYHLPGWSVSILPDCKNVVLNTAKINSASMISSFATESLKEEVDSLDGSSSGWSWISEPVGISKADAFSKPGLLEQINTTADRSDYLWYSLSFVVEDNAADQYVLHIESLGHALHAFINMKLAGSKAGNSGNAKVNVDIPITIVAGKNTIDLLSLTVGLQNYGAFYDTVGAGITGPVTLKFPKNGSTADLSSQQWTYQVGLQGEDLGLSSGSVGQWNSQSTLPTNQPLTWYKTNFVAPSGSNPVAIDFTGMGKGEAWVNGQSIGRYWPTYVAPNSGCTDSCNYRGGYSASKCLKNCGKPSQTLYHVPRSWLKPDSNTLVLFEESGGDPTKISFATKQIESVCSHVSESHPPPVETWNSDTDSGRKVGPVLSLECPYPNQVISSIKFASFGTPLGTCGNFNQGQCSSNRALSIVQKACIGSSSCSIGVSINTFGNPCRGVTKSLAVEAACT 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03569 840 Pfam Beta-sandwich domain in beta galactosidase 345 415 IPR041392 -
Tsu02g03569 840 Pfam Glycosyl hydrolases family 35 33 337 IPR031330 -
Tsu02g03569 840 PANTHER BETA-GALACTOSIDASE RELATED 8 834 IPR001944 GO:0004553|GO:0005975
Tsu02g03569 840 PANTHER BETA-GALACTOSIDASE 8 834 - -
Tsu02g03569 840 Gene3D - 755 840 IPR043159 -
Tsu02g03569 840 Gene3D Glycosidases 20 341 - -
Tsu02g03569 840 SUPERFAMILY (Trans)glycosidases 25 342 IPR017853 -
Tsu02g03569 840 Gene3D - 682 735 - -
Tsu02g03569 840 Gene3D - 571 667 - -
Tsu02g03569 840 Gene3D - 422 570 - -
Tsu02g03569 840 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Tsu02g03569 840 ProSiteProfiles SUEL-type lectin domain profile. 754 840 IPR000922 GO:0030246
Tsu02g03569 840 Pfam Galactose binding lectin domain 762 839 IPR000922 GO:0030246
Tsu02g03569 840 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Tsu02g03569 840 PRINTS Glycosyl hydrolase family 35 signature 643 659 IPR001944 GO:0004553|GO:0005975
Tsu02g03569 840 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Tsu02g03569 840 PRINTS Glycosyl hydrolase family 35 signature 616 630 IPR001944 GO:0004553|GO:0005975
Tsu02g03569 840 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Tsu02g03569 840 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Tsu02g03569 840 PRINTS Glycosyl hydrolase family 35 signature 285 300 IPR001944 GO:0004553|GO:0005975
Tsu02g03569 840 PRINTS Glycosyl hydrolase family 35 signature 248 263 IPR001944 GO:0004553|GO:0005975
Tsu02g03569 840 PRINTS Glycosyl hydrolase family 35 signature 305 321 IPR001944 GO:0004553|GO:0005975
Tsu02g03569 840 SUPERFAMILY Galactose-binding domain-like 584 749 IPR008979 -
Tsu02g03569 840 SUPERFAMILY Galactose-binding domain-like 399 571 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03569 Tsu-Chr2 40115314 40120834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03569 20 693 Glycoside Hydrolase AT2G28470 75.735 0.0 1074
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03569 - - gmx:100793198 1518.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03569 02 40115314 40120834 Tsu02g03569 02 40115314 40120834 ECH