Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03558 ATGCAACAAGCTAGTTCTCATTGCCAAAGAATCAAAATGATGTTGAAGAAGCAATCTCATCTTATGTCCTTGTCACTTGCAATACTAGTTTCCCTCTTGTATTCGATCACCGTTACCGTATCCCAATTATCACCTGCTAGTGCTCCAACAATACAACCAAAACTACCAGCTCCAACCTCGCCTGCTGCAGCTCCAAAACCATTGGTACCTTCATTGCCGGAGTCGCCCAGTGATTCCACACCGGACATTACAGGCGCAGTTGACATTGTTGGAATCCTCCGAAAGGCCAAGTCATTCAACGTATTAATCCGATTAATGAAAACAACTCAATTGATCAACCAACTCAATTCACAACTATTGACTATAAAATCAGGTGGATTAACGATTCTCGCACCAGATGACAACGCTTTCTCAGGACTCAAAGCAGGATTCCTCAACTCTCTTTCCGATGAACAAAAACTTGAGCTGTTACAATTCCACGTTATTTCAGATTACGTGTCTAGCTCAAACTTCGATACTTTGACAAACCCTGTTAGAACACTTGCCGGAGCAAAACCCGGAAAGGTTGAACTAAATGTGATAAGTTACGGTGGAAGTGTGAACATATCAACCGGGGAGGTTAACACCACAATCGATGGCATTATATATACCGATAAACATCTTGCTATTTATAAAGTTGGTAAAGTGCTTCTTCCTATGGAATTCTTTTCTGTTGCTAAGGCACCAGGGAAGGCACGCTCTTTGGCGCCAGAACCTTCAGCTTTGACTCCAAAAGCCGATACGGAAAAGCCACTCTCACCAGATTCCTCTGACTCATCTCAGGTTAAGAAGCCCTCAAATGATAACTCTAGCACTGTGAAAATGAATGTTTATGGAAAGTGGGTGTCTCTTGCTCTAGGAGCATTTATAATGACTATGATGGCACAATAA 930 0.4226 MQQASSHCQRIKMMLKKQSHLMSLSLAILVSLLYSITVTVSQLSPASAPTIQPKLPAPTSPAAAPKPLVPSLPESPSDSTPDITGAVDIVGILRKAKSFNVLIRLMKTTQLINQLNSQLLTIKSGGLTILAPDDNAFSGLKAGFLNSLSDEQKLELLQFHVISDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTIDGIIYTDKHLAIYKVGKVLLPMEFFSVAKAPGKARSLAPEPSALTPKADTEKPLSPDSSDSSQVKKPSNDNSSTVKMNVYGKWVSLALGAFIMTMMAQ 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03558 309 MobiDBLite consensus disorder prediction 247 284 - -
Tsu02g03558 309 MobiDBLite consensus disorder prediction 266 284 - -
Tsu02g03558 309 MobiDBLite consensus disorder prediction 52 80 - -
Tsu02g03558 309 Pfam Fasciclin domain 98 232 IPR000782 -
Tsu02g03558 309 MobiDBLite consensus disorder prediction 52 74 - -
Tsu02g03558 309 Gene3D FAS1 domain 73 232 IPR036378 -
Tsu02g03558 309 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 20 308 - -
Tsu02g03558 309 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 20 308 IPR045003 -
Tsu02g03558 309 SMART fasc_3 128 233 IPR000782 -
Tsu02g03558 309 SUPERFAMILY FAS1 domain 86 233 IPR036378 -
Tsu02g03558 309 ProSiteProfiles FAS1/BIgH3 domain profile. 86 215 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03558 Tsu-Chr2 39978353 39979282 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03558 - - gmx:100790242 439.499