Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03557 atgatgttgaAGAAGCAATCTCATATCTTGTCCTTGTCATTGGCAATAGTAGTTTCCCTTTTGTATTCTACCACCGTAACTTTATCGCAATTATCACCTGCTAATGCTCCGATAAAACCTACCCTACCTTCACCGACGGTACCAGCCGCAGCCCCAAAACCATTGGTTCCTTCATTACCACAATCGCCTTCACCCACCGATGCCACACCCGACACTCCAAGCGTTGACATCGTCGGAATCCTGAGGACAGCCAAGTCATATAACGTCCTAATCCGACTCATGAAAACTACTCAATTGACCAACCAACTCAATTCACAATTATTGACTATCAAATCAGGCGGATTAACGCTTCTCGCACCAGATGACAGCGCCTTCTCAGGACTCAAACCAGGATTTCTCAACTCTCTTTCCGATGCACAAAAACTCGAGCTTTTACAGTTCCACGTCATTTCAGATTATGTATCTAGCTCTAACTTCGACACTCTAACTAACCCTGTAAGAACACTTGCCGGAGCCAAACCCGGAAAGGTGGAACTAAATGTCATTAGTTACGGTGGAAGTGTGAACATATCAACAGGGGAAGTGAACACTACAATTGACGGCATTATATATACCGATAAACATCTTGCTATTTATAAAGTTGGTAAAGTGCTTCTTCCTACGGAATTCTTTTCTAAAGCTAAGGCACCGGGGAAGGCACCATCTTTGGCACCAGAACCTTCCGCATTGACTCCAAAAGCCGATAAGGAGAAACCATTATCACCAGATTCTTCGGATTCTTCAGATTCATCATCTCGAGTTAAGCCTTCCAATAATAGTTCCGGTACTGTGAAAATAAACGTGAATGGAAAGTGGATTTCCCTTGTTCTTGGTCTTGGAATTCTTATCTTAACTTCATTGACAGCATAA 909 0.4257 MMLKKQSHILSLSLAIVVSLLYSTTVTLSQLSPANAPIKPTLPSPTVPAAAPKPLVPSLPQSPSPTDATPDTPSVDIVGILRTAKSYNVLIRLMKTTQLTNQLNSQLLTIKSGGLTLLAPDDSAFSGLKPGFLNSLSDAQKLELLQFHVISDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTIDGIIYTDKHLAIYKVGKVLLPTEFFSKAKAPGKAPSLAPEPSALTPKADKEKPLSPDSSDSSDSSSRVKPSNNSSGTVKINVNGKWISLVLGLGILILTSLTA 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03557 302 MobiDBLite consensus disorder prediction 42 73 - -
Tsu02g03557 302 SMART fasc_3 116 221 IPR000782 -
Tsu02g03557 302 ProSiteProfiles FAS1/BIgH3 domain profile. 74 203 IPR000782 -
Tsu02g03557 302 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 289 - -
Tsu02g03557 302 SUPERFAMILY FAS1 domain 65 221 IPR036378 -
Tsu02g03557 302 MobiDBLite consensus disorder prediction 257 274 - -
Tsu02g03557 302 MobiDBLite consensus disorder prediction 228 274 - -
Tsu02g03557 302 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 289 IPR045003 -
Tsu02g03557 302 Gene3D FAS1 domain 59 221 IPR036378 -
Tsu02g03557 302 MobiDBLite consensus disorder prediction 42 67 - -
Tsu02g03557 302 Pfam Fasciclin domain 87 220 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03557 Tsu-Chr2 39975537 39976756 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03557 - - gmx:100790242 378.252