Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu02g03555 | ATGGCGAGAAGCGCCTCTCAATCATCCCAATCAGCATCATCCGCCGCCACAACACGACCAGGTGTAATGGCACCTCGCGGCTCCGCTGCCGCTACAGCTGGAATGCGCCGTCGTCGTCTTGGAGGTGGAAACACCACAAGCTCAAGCTCTGCCGGAGGAGGATCAAGCGGCGGAAACAACATGCTCCGATTCTACACCGACGATGCACCTGGCTTGAAGATTTCACCAACGGTTGTTCTTGTAATGAGTCTCTGTTTCATTGGATTCGTCACCGCTCTTCATGTTTTTGGTAAACTCTACCGTTATCGATCTGCCGCTGGTGCTGGTGCTTGA | 333 | 0.5405 | MARSASQSSQSASSAATTRPGVMAPRGSAAATAGMRRRRLGGGNTTSSSSAGGGSSGGNNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRYRSAAGAGA | 110 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu02g03555 | 110 | PANTHER | SEC61 SUBUNIT BETA | 1 | 106 | IPR030671 | GO:0005784|GO:0006886 | |
| Tsu02g03555 | 110 | PANTHER | PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA | 1 | 106 | - | - | |
| Tsu02g03555 | 110 | Pfam | Sec61beta family | 58 | 97 | IPR016482 | - | |
| Tsu02g03555 | 110 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
| Tsu02g03555 | 110 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
| Tsu02g03555 | 110 | MobiDBLite | consensus disorder prediction | 41 | 58 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu02g03555 | Tsu-Chr2 | 39952474 | 39953051 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu02g03555 | K09481 | - | csv:101211539 | 122.094 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Tsu02g05059 | 02 | 59671518 | 59672318 | Tsu02g03555 | 02 | 39952474 | 39953051 | PCT |