Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03542 ATGGCCGAAACATCCTCATCagacaataacaataacaacaatattCCAATCGAAATTGTTACCGACGAAGAAATGGCTTTGATAGAAGCAGCTTATGCTTCAATTTCTTCTACTATTTTGTCTCGTTCTCTTTCTTCTTGTTGTTCTTCATCAacaccttcttcttctcctcgTCTTCTTCATCAAAACAATGTTCTCTCCATTAATTCAATTACCCTTTTATCAAAACGAAAACTTTCATCATCATGTGATGCTTCTGGTGCTGCTGCTGGTGATATTGAAGATACTCTTAAATTTGTTAATTCACAAAAGAAACCCAATCTTTCTGATTCTTTTCTCCGTCGTTTTAGGAAGAAACGTGCTTTGTCCGTCACTGATCTTACTTCTACGGAATGGTGCCCTAAACAAATGGAATTTACACTCACTCTTGGAGGACGAAAGGTCAATCAATTTATGAAAGCTGGCATTGCTCGACATGCAAAACTTGAAGCAGAGGTTATAAAACGGGTGGAAGTAAAGATCCAATCACAAGAAGATCGCTGGGCCCTGAagtttcttaattttataagtGGTGTGAATCAATTATTGTTTGAAGGATTAACTCGGGAACTGCCGATAATAGGCTTTGCAGACGATATATGGATGGTGGGAGTGATTGACGAGGTTCGGATGCCATTAACCGAAAATGATCATAATCCAATACTAATTGACACAAAGACTCGTGCTCGAGATACACTTCCCGCTGAACCACAACGAAGAAACGGACGGCTTCAATTGATGTGTTACAAGTACATGTGGGACAATTTAGTTTCTGATAACTTTCCTTCTAAAaacttttttacttattttggCTTAAACCCTAAAAGTATTCTATGTGAAGATCTCAAAGTGTTAAGTGCTGACTCTGGATTTTGTGCTTCGACCCTTGATGATGTGGTGAGATATTACAGAAATACTTATATGATGTTGTCGCCTGCTAATGATCAGCTTTTGTTGAGATACGAGTATCAGAAAGATCATTCACTGCTTTGCGAAGATAAATTTACATATGATTCTGAGTGgctaaagaatcaaattcattcTTGTCTTGAGTTTTGGCATGGAGAGCGAGAAGCCGCCTATGTTCACGAGGAGGAGCGTTGGAAATGTCGATTCTGCCAATATGCCACCTTCTGTCCTGCATATACCGATAGTAAGGGAATGAATGCCAATACAAGCAATGATTCAAAAGCCAAAGAAGTCTAG 1245 0.3631 MAETSSSDNNNNNNIPIEIVTDEEMALIEAAYASISSTILSRSLSSCCSSSTPSSSPRLLHQNNVLSINSITLLSKRKLSSSCDASGAAAGDIEDTLKFVNSQKKPNLSDSFLRRFRKKRALSVTDLTSTEWCPKQMEFTLTLGGRKVNQFMKAGIARHAKLEAEVIKRVEVKIQSQEDRWALKFLNFISGVNQLLFEGLTRELPIIGFADDIWMVGVIDEVRMPLTENDHNPILIDTKTRARDTLPAEPQRRNGRLQLMCYKYMWDNLVSDNFPSKNFFTYFGLNPKSILCEDLKVLSADSGFCASTLDDVVRYYRNTYMMLSPANDQLLLRYEYQKDHSLLCEDKFTYDSEWLKNQIHSCLEFWHGEREAAYVHEEERWKCRFCQYATFCPAYTDSKGMNANTSNDSKAKEV 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03542 414 Gene3D - 104 394 IPR011604 -
Tsu02g03542 414 PANTHER EXONUCLEASE V 1 407 IPR019190 GO:0045145
Tsu02g03542 414 Pfam Exonuclease V - a 5' deoxyribonuclease 229 292 IPR019190 GO:0045145
Tsu02g03542 414 Pfam Exonuclease V - a 5' deoxyribonuclease 322 392 IPR019190 GO:0045145
Tsu02g03542 414 Pfam Exonuclease V - a 5' deoxyribonuclease 112 225 IPR019190 GO:0045145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03542 Tsu-Chr2 39788881 39793012 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03542 K17815 - gmx:100792136 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03542 02 39788881 39793012 Tsu02g03542 02 39788881 39793012 ECH