Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03541 ATGTCGGCACCACAAAGACTACTACTACTCTCCAATCTCTCTCATTCTTCTCCTCTCTCTTCCTTCAAATCTAGAACCTtcttttttcttccattctCATCTTCCTCACTCTCACTACCAATGCCTCGCAACAATCAGCGAAGTGGAGGCCGCGGAGAACAGAGATGGAAAGAGAAACCAAAAACTGAACCGCAAGTATCGGCTATTGGAAATGCGGAAACGGTTACTAACAAACTTTCTGGAATTCATATTGGTGAATCTAAATCTAACGTGGTTCAGCATGGTAATAATAAGGTTACTTCAACGGCGATTTGGAAACCGAAATCTTATGGAACTGTTAGTGGAGGAGCAACTGTAACTGAAGTTGAACGGAAGCCGGTTGGTGAAGCGAAGGTTGATGGTTCAGGTGTTGGTGTTGATGTGGCTTCAAGCTCAACTCAGAGAAATAATGGTAGTGCTAGTTTGAGTAACTCATCCAACAGTAAATTGTTGGAGAATTTTACTGTGGATAATTCCACTTATGCTCATGCGCAAATCAGGGCGTCTTTTTACcccaaatttgaaaatgaaaagtcTGATCAAGAGACAAGGTCAAGGATGATTGAGTTGGTATCAAAAGGTTTAGCTACATTAGAGGTTTCACTTAAACACTCCGGCTCTCTTTTTATGTATGCGGGTCATGAGGGTGGAGCTTATGCAAAAAACAGTTTTGGAAATATATATACTGCTGTTGGTGTATTTGTTCTTGGGCGGATGTTTTGTGAGGCTTGGGGAACTGAAGCTTTAAAAAAGCAGGctgaatttaataattttcttgagAGAAACCATATGTGCATATCAATGGAATTAGTAACTGCTGTTCTTGGAGACCATGGACAGCGTCCTCATGAAGACTATGTGGTGGTTACAGCAGTCACTGAATTGGGCAATGGAAAGCCAAAATTCTATTCAACCCCTGAGATAATCGCTTTTTGCAGAAAATGGCGATTACCAACAAATCACGTGTGGTTGTTCTCAACAAGAAAATCAGCCTCTTCCTTCTTTGCTGCCTATGATGCCTTATGTGAGGAAGGTACTGCAACTTCTGTATGCAGGGCTCTTGATGAAATTGCCGACGTATCTGTACCAGCTTCAAAAGACCATGTGAAATCCCAAGGTGAAATTTTAGAGGGTCTTGTGGCTCGTCTTGTAAGCCATGAGAGTTCAAACCATATAGAGAAAATTTTGAAGGAATTTCCCCCTCCACCTGCTGATGGAGCTGCCCTCGATTTCGGTCCAAGTCTAAGGGAAATTTGTGCTGCCAATAGATCTGATGAAAAACAGCAAGTGAAAGCGCTTCTTGAGAGTGTTGGTAGCTCATTTTGTCCTGATTACTTAGATTGGTCTGGGACCGATGCTGCTGATGTTCATTCAAGAAATGCGGACAAATCCGTTCTTCCTAAGTTTTTACAAGCCCATCCGGCAGactattcaacaaaaaaattgcagGAAATAATTCGTTTGATGAGGGAAAAACGCCTCCCTGCTGCATTCAAATGTTATCATAACTTCCACAAAGTTGATGCCATTTCAAATAACAACCTTTTCTATAAAATGGTCATTCATGTGCACAGTGATTCTGCTTTTCGGAGATACCAAAATGAGATGAGGAAACAACCAGGATTATGGCCACTTTATCGagGATTTTTTGTTGATATCAATTTATTCAAGGCAGACAAAGAGAAAGTCGCCGAAATTTCTAAGAACAACAGTATAAATGAAAGTGGTAGCACCAGTACTGAAAAAGATGATTTTGCTGACGAAGATGCAAATTTAATGGTCAAATTGAAGTTTCTTACATATAAGCTGCGAACCTTTCTCATTCGAAATGGATTGTCAGTTCTGTTTAAAGAAGGTACAGGTGCTTACAAGGCATATTACCTGAGACAAATGAAAAAATGGGGAACCTCTCCAGGAAAGCAGAGAGAACTTATCAAAATGCTTGATGAATGGGCTCTGTATATAACAAGAAAGTATGGAAAAAGGCAACTTTCATCATCAATATATCTTAGTGAAGCTGAACCTTTCCTTGAACAGTTTGGAAAACGTAGTCCACAGAACCAAGCTCTAATAGGTTCTGCTGGTAATTTAGTTAGGTCCGAAGATTTCTTGGCCATTGTTGAGGGAGGCCATGATGAAGAAGGTGATCTTGTATCAGAGCGGGATATAACACCATCAGGGTCTAATATCCCAGTCAGAGACACAGTTCCAAAAGATGAAGGGATGATTGTATTCTTTCCCGGAATACCAGGCTGTGCAAAGTCTGCCCTTTGCAAAGAATTGCTAAATGCACAAGGAGGACTACTAGGAGATGATCGACCCGTTCATAGTCTCATGGGTGATCTAATTAAAGGAAAATATTGGCAGAAAGTCGCTGAAGAGCGCAAAAAGAAACCGAAGTCTATAATGCTTGCTGACAAGAATGCCCCAAATGAAGAAGTTTGGAGACAGATAGAAGACATGTGTCACAGAACCAGGGCATCTGCTGTCCCAGTTGTGCCTGAATCTGAAGGAACTGATTCAAATCCATTTTCCCTTGATGCTTTAGCTGTCTTCATGTTTCGTGTGCTTCAACGAGTCAATCATCCAGGAAATCTTGACAAGGCATCTCCAAATGCTGGCTATGTGCTGCTAATGTTCTATCACCTTTATGATGGCAAGAGCCGCaaagagtttgagggtgaattAATTGACCGTTTTGGGTCACTTGTGAAGATCCCATTATTGAAATCCGATAGGAATCCCCTTCCCGAGGCAGTGCAGTGCATTTTGGAGGAAGGAATCAATCTATATAAGCTTCACACTAGAAGACATGGAAGGTTAGAATCTACCAAGGGTACATACGCAAAGGAATGGGTGAAATGGGAGAAACAATTACGGGATATTCTTTTTGGAAATGCTGATTATCTTAATACAGTCCAGGTTCCATTCGAGGTTGCTGTCAACCAAGTGTTGGAACAATTGAGAAACATTGCTAAGGGAGATTACACGCCTCCAGATACTGCAAAGAGGACGTTTGGTACCATTGTTTTTGCTGCTCTCAGTCTGCCAGTAATAGAAATTCAAAGTGTCCTAAACAATTTGGCCAAGAATAATCCGAAGATTGATGAATTCCTTAAAGATAAGCATCTAGATAATCTTAATCGAGCTCACTTGACACTTGCCCACAAGAGAAGTCATGGCATCAAAGCTGTTGCTGATTATGGTCTGTGGCTGCATAAAAAGGCACCAGTGGAGTTGACGGCACTGCTCTACTCAGATAAAATGGCTGCTTTTGAAGCTTTTCCTGGCTCAGTGGAAGGAGAGAAGATAGTTCCGAAAAATGCATGGCCCCATATTACCTTGTGGACTAGTCAAGGGGTTTCAGCCAAGGAGGCCAACATGTTACCACAGTtgtttgcagaggggaaagcaAATCGGATCGACTTAAATCCTCCCATTAATGTGTCTGGCACGGTTGAGTTTTTTTGA 3510 0.4026 MSAPQRLLLLSNLSHSSPLSSFKSRTFFFLPFSSSSLSLPMPRNNQRSGGRGEQRWKEKPKTEPQVSAIGNAETVTNKLSGIHIGESKSNVVQHGNNKVTSTAIWKPKSYGTVSGGATVTEVERKPVGEAKVDGSGVGVDVASSSTQRNNGSASLSNSSNSKLLENFTVDNSTYAHAQIRASFYPKFENEKSDQETRSRMIELVSKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMFCEAWGTEALKKQAEFNNFLERNHMCISMELVTAVLGDHGQRPHEDYVVVTAVTELGNGKPKFYSTPEIIAFCRKWRLPTNHVWLFSTRKSASSFFAAYDALCEEGTATSVCRALDEIADVSVPASKDHVKSQGEILEGLVARLVSHESSNHIEKILKEFPPPPADGAALDFGPSLREICAANRSDEKQQVKALLESVGSSFCPDYLDWSGTDAADVHSRNADKSVLPKFLQAHPADYSTKKLQEIIRLMREKRLPAAFKCYHNFHKVDAISNNNLFYKMVIHVHSDSAFRRYQNEMRKQPGLWPLYRGFFVDINLFKADKEKVAEISKNNSINESGSTSTEKDDFADEDANLMVKLKFLTYKLRTFLIRNGLSVLFKEGTGAYKAYYLRQMKKWGTSPGKQRELIKMLDEWALYITRKYGKRQLSSSIYLSEAEPFLEQFGKRSPQNQALIGSAGNLVRSEDFLAIVEGGHDEEGDLVSERDITPSGSNIPVRDTVPKDEGMIVFFPGIPGCAKSALCKELLNAQGGLLGDDRPVHSLMGDLIKGKYWQKVAEERKKKPKSIMLADKNAPNEEVWRQIEDMCHRTRASAVPVVPESEGTDSNPFSLDALAVFMFRVLQRVNHPGNLDKASPNAGYVLLMFYHLYDGKSRKEFEGELIDRFGSLVKIPLLKSDRNPLPEAVQCILEEGINLYKLHTRRHGRLESTKGTYAKEWVKWEKQLRDILFGNADYLNTVQVPFEVAVNQVLEQLRNIAKGDYTPPDTAKRTFGTIVFAALSLPVIEIQSVLNNLAKNNPKIDEFLKDKHLDNLNRAHLTLAHKRSHGIKAVADYGLWLHKKAPVELTALLYSDKMAAFEAFPGSVEGEKIVPKNAWPHITLWTSQGVSAKEANMLPQLFAEGKANRIDLNPPINVSGTVEFF 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03541 1169 MobiDBLite consensus disorder prediction 39 65 - -
Tsu02g03541 1169 MobiDBLite consensus disorder prediction 130 157 - -
Tsu02g03541 1169 PANTHER TRNA LIGASE 1 101 1153 IPR038837 GO:0003972|GO:0006388
Tsu02g03541 1169 PANTHER TRNA LIGASE 1 101 1153 - -
Tsu02g03541 1169 MobiDBLite consensus disorder prediction 139 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03541 Tsu-Chr2 39766402 39787217 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03541 - - gmx:100815563 1861.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03541 02 39766402 39787217 Tsu02g03541 02 39766402 39787217 ECH