Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03538 atgaatCAAAGAGAGTGGGTAAGATTCAAAGTCTGTGTAAGAGAATTCATGATTGGGGTTTCAGAGTTAACAGTTGAGTTTGCCAAAGGTTGCAGAGATATAGTGAAACAAAGCTTAGTCAATGAAGATTCCTTAATTGtaagaaaatttggaaaaagtTCTTACATTGGGAAGAGAGTAAGAGAACCATGTAACAAGATTTTcgaaaaattgagtttttttaatgACTTTTTGCCTGAAGATAAAGACCCACTTCATGCTTGGTCTGTTATATTGTTGGTTTCTTTACTTGCTTTTTCAGCTTTGTATGTAAATTTTGAGCATGATCCATCTGTCCCACTTGTGAAACAAGTATTTTTGCATCCTGCTAGTGCTACCCGCATTGTACTTCCGGATGGAAGATACATGGCATATAAGGAGCAAGGTGTTTCGGCTGATAGAGCTAGATTTTCAATTATTGCTCCTCATACTTTTCTTTCCTCGAGGCTTGCAGGAATTCCTGGAGTTAAAGATTCACTGCTGGAAGAGTTTGGCATTCGCTTGCTCACTTATGATCTGCCTGGTTTTGGTGAGAGTGATCCTCATCCCAAGCGAAATCTGGAATCCTCAGCAATAGATATGTCGTTTTTAGCCGATGCTCTTGGTGTTGACAAGTTTTGGGTTATTGGTTACTCTAGTGGAAGCAAGCATGCTTGGGCTGCACTTAGATACATACCTGATAGACTTGCAGGTGCTGCCATGTTCGCCCCCATGGTGAATCCGTATGATCCTTTGATGACAAACGAAGAGAGACGAAGAACATGGAACAAATGGACgcgaaaaagaaaattgatgtaCTTCTTAGCTCGAAGATTTCCTagacttctttctttcttctatcAGCGAAGTTTCTTGTCAGGGAAGCATGGTCAGATTGATAGGTGGCTGTCTTTATCTCTTGGAAGTAGGGATAAAGCACTAATGGAAGATCCAATCTATGAGGAATTCTGGCAAAGGGATGTGGAAGAATCAATCAGGCAAGGAAATGCGAAACCCTTTGTGGAGGAAGCTGCTTTGCAGGTATCAAATTGGGGTTTCAGCCTTTTAGACCTCAAGTTGCAGAAACGGAAGCTCAACAGGAATGTGCTTAATTGGCTTAAGGCAATGTTCACTGAAACTCAGGAGTATACAGGCTTTCTCGGTCCAATACATATATGGCATGGAATGGATGATAAAGTGGTTCCACCATCAATGACTGATTTTGTGCATCGCGTACTACCTGGAGCAGCAGTACACAAACTCCCATATGAAGGCCATTTCACCTATATCTACTTTTGTCATGAATGCCATAGACAGATATTTACTACACTTTTCGGAACCCCGCAAGGCCCTCTCATCCTTGACGTTTCTTTACAAGTAGATCCAAATACCCTAGAAGCCAATGTTGAACAGAAAGAAGTAGTAGCAAGTAGTGGTGATAGTGccacaaattaa 1473 0.391 MNQREWVRFKVCVREFMIGVSELTVEFAKGCRDIVKQSLVNEDSLIVRKFGKSSYIGKRVREPCNKIFEKLSFFNDFLPEDKDPLHAWSVILLVSLLAFSALYVNFEHDPSVPLVKQVFLHPASATRIVLPDGRYMAYKEQGVSADRARFSIIAPHTFLSSRLAGIPGVKDSLLEEFGIRLLTYDLPGFGESDPHPKRNLESSAIDMSFLADALGVDKFWVIGYSSGSKHAWAALRYIPDRLAGAAMFAPMVNPYDPLMTNEERRRTWNKWTRKRKLMYFLARRFPRLLSFFYQRSFLSGKHGQIDRWLSLSLGSRDKALMEDPIYEEFWQRDVEESIRQGNAKPFVEEAALQVSNWGFSLLDLKLQKRKLNRNVLNWLKAMFTETQEYTGFLGPIHIWHGMDDKVVPPSMTDFVHRVLPGAAVHKLPYEGHFTYIYFCHECHRQIFTTLFGTPQGPLILDVSLQVDPNTLEANVEQKEVVASSGDSATN 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03538 490 SUPERFAMILY alpha/beta-Hydrolases 122 446 IPR029058 -
Tsu02g03538 490 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 11 473 - -
Tsu02g03538 490 Pfam alpha/beta hydrolase fold 168 436 IPR000073 -
Tsu02g03538 490 Gene3D alpha/beta hydrolase 75 441 IPR029058 -
Tsu02g03538 490 PANTHER ALPHA/BETA FOLD HYDROLASE 11 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03538 Tsu-Chr2 39719309 39723997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03538 177 257 Acyl Lipid Metabolism Gene Families AT4G02340 34.884 1.95e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03538 - - gmx:100790561 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03538 02 39719309 39723997 Tsu02g03538 02 39719309 39723997 ECH