Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03533 atgagaacaaGCAACCACTTAATTGGAGTACTAAATTTCCTAACATTTTTACTCTCAATTCCAATCCTAGGTGGTGGAATCTGGCTAAGCAGTAGAGCAAACAACACAGATTGTTTAAAATTCCTTCAATGGCCACTAATCATAATTGGTATAAGCATAATGGTTGTTTCATTAGCTGGTTTCGCAGGCGCGTGTTACCGGAACACTTTTCTTTTACGTTTCTATCTTGTTGTCATGTTCTTAATTATTGCAGTACTTATTGGATTCATAATATTTGCATACGTTGTAACTGATAAAGGTGAAGGAAGAAGGATGATTAATAGAGGGTATTTGGATTATTATTTGGATGATTATTCTGGTTGGTTAAAGGATCGTGTTAAGAGTGATGAATATTGGGGGAAGATTAGTTCTTGTATTAGAGATTCTAAAACTTGTAGGAAATTGGCTAGGAATTTTAATGGTGTTCCTGAGACTTCTGATATGTTCTTTGAAAGAAAACTCAGTCCTATTCAGTCTGGTTGCTGCAAGCCTCCAACAGATTGTGGCTATATGTATCAAAATGAAACAGTATGGATCCAAGGAGCAGGACTAATGGGAAGCAATCTTGACTGCAATAAATGGAACAATGACCAACAATTGCTATGTTATGACTGTGATTCTTGCAAAGCTGGTGTACTTGGTAGTCTCAAGAAAAGTTGGAGAAAAGTCTCAGTGATCAATATTGTTGTCATGATCATCCTTGTAATTGTTTACATAATTGCTTATTATGCTTATAGGAACAACAAAAGGATGGATAATGATGAACCTTATGGTGAAGCAAGGATGACAAAGTCACAACCTAGTGCTTTTCATCTTTGA 858 0.3543 MRTSNHLIGVLNFLTFLLSIPILGGGIWLSSRANNTDCLKFLQWPLIIIGISIMVVSLAGFAGACYRNTFLLRFYLVVMFLIIAVLIGFIIFAYVVTDKGEGRRMINRGYLDYYLDDYSGWLKDRVKSDEYWGKISSCIRDSKTCRKLARNFNGVPETSDMFFERKLSPIQSGCCKPPTDCGYMYQNETVWIQGAGLMGSNLDCNKWNNDQQLLCYDCDSCKAGVLGSLKKSWRKVSVINIVVMIILVIVYIIAYYAYRNNKRMDNDEPYGEARMTKSQPSAFHL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03533 285 PANTHER TETRASPANIN-4 1 280 - -
Tsu02g03533 285 PANTHER TETRASPANIN-8-RELATED 1 280 IPR044991 GO:0009734|GO:0016021
Tsu02g03533 285 Pfam Tetraspanin family 6 253 IPR018499 GO:0016021
Tsu02g03533 285 PRINTS Transmembrane four family signature 39 65 - -
Tsu02g03533 285 PRINTS Transmembrane four family signature 6 29 - -
Tsu02g03533 285 PRINTS Transmembrane four family signature 66 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03533 Tsu-Chr2 39670449 39675703 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03533 1 276 Miscellaneous Gene Families AT5G60220 73.551 1.52e-131 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03533 - - gmx:100798336 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03533 02 39670449 39675703 Tsu02g03533 02 39670449 39675703 ECH