Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03523 ATGGCATCATCACGAATCATATCTCATCCTCCACCAAATCTCCACCGTCAATCTTCCCCTTTTGACACCGTTAAACCTCTTCCACCTCTAAATCTCAATCTCCACCCTAAACGACACCGTAACCTCCGCATTCACACTTCCCtgagtagtagtagtagtcACAGAGATAACGACCTCAACGACACCGTCCAATTGCGAACTAACTCCGTCTCCGCTGTCACAAACGACGTCGTTTCCAAAGATCCGATCTCTCTTCCTCGTCCTTTGTCTTCGAATCAATCATCTAGTGCTGTTTCCGATGGTTCACGACTTCGTGTTGCATATCAGggagTTCGTGGTGCTTATAGTGAATCTGCTGCACAAAAGGCCTACCCTAATTGTGAAGCTGTTCCTTGTGAACAATTTGACACTGCTTTTGAAGCTGTAGAAAGGTGGCTTGTGGACAGAGCAGTTTTGCCAATTGAGAATTCTTTGGGAGGTAGCATCCACAGAAATTATGACCTTTTACTCAGGCACAGACTACATATAGTAGGAGAAGTAAAATATGCAGTCCATCATTGTTTGATGGCCAACCATGGTGttaaacttgagaatttgaagcGTGTCCTTAGTCATCCTCAGGCTCTTGCACAATGTGAGAACACCTTGACTGGGTGGGGCTTAGTTAGAGAAGCAGTTGATGATACAGCCGGTGCTGCAAAGCATGTTGCCCTCAATAACCTACAAGATGCAGGAGCTGTTGCTAGCTCTGCTGCTGCTGAGATCTATGGCTTAAATATACTTGCTCAAGACATTCAGGATGATAGTGATAATATCACCCGGTTTTTGGTGTTGGCACGAGAACCTATACTTCCAGGCATAGACAGGCCATTTAAGACAAGCATAGTTTTTTCTTTAGAAGAGGGTCCTGGGATACTTTTCAAGGCCCTTGCTGTTTTTGCCCTACGTCAAATTAATCTTTCAAAGATTGAAAGTCGTCCTCTGCGGAAGCAACCTCTAAGAACATCTGATGATAATAGCAATAGGTACTTTGATTATCTTTTCTATGTTGATTTTGAAGCATCAATGGCTGATCAGAATGCACAAAATGCCTTAAGGCATCTAAAGGAGTTTGCTACATTCTTGCGAGTGCTGGGGAGTTATCCTATGGACATTAGCATGACATAA 1167 0.4225 MASSRIISHPPPNLHRQSSPFDTVKPLPPLNLNLHPKRHRNLRIHTSLSSSSSHRDNDLNDTVQLRTNSVSAVTNDVVSKDPISLPRPLSSNQSSSAVSDGSRLRVAYQGVRGAYSESAAQKAYPNCEAVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKYAVHHCLMANHGVKLENLKRVLSHPQALAQCENTLTGWGLVREAVDDTAGAAKHVALNNLQDAGAVASSAAAEIYGLNILAQDIQDDSDNITRFLVLAREPILPGIDRPFKTSIVFSLEEGPGILFKALAVFALRQINLSKIESRPLRKQPLRTSDDNSNRYFDYLFYVDFEASMADQNAQNALRHLKEFATFLRVLGSYPMDISMT 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03523 388 Gene3D - 189 268 - -
Tsu02g03523 388 ProSiteProfiles Prephenate dehydratase domain profile. 105 280 IPR001086 GO:0004664|GO:0009094
Tsu02g03523 388 SUPERFAMILY ACT-like 275 384 IPR045865 -
Tsu02g03523 388 MobiDBLite consensus disorder prediction 1 20 - -
Tsu02g03523 388 ProSitePatterns Prephenate dehydratase signature 2. 320 327 IPR018528 GO:0004664|GO:0009094
Tsu02g03523 388 SUPERFAMILY Periplasmic binding protein-like II 105 285 - -
Tsu02g03523 388 MobiDBLite consensus disorder prediction 1 38 - -
Tsu02g03523 388 ProSitePatterns Prephenate dehydratase signature 1. 256 278 IPR018528 GO:0004664|GO:0009094
Tsu02g03523 388 ProSiteProfiles ACT domain profile. 294 382 IPR002912 -
Tsu02g03523 388 CDD ACT_CM-PDT 292 382 - -
Tsu02g03523 388 Pfam Prephenate dehydratase 106 282 IPR001086 GO:0004664|GO:0009094
Tsu02g03523 388 PANTHER AROGENATE DEHYDRATASE 40 387 - -
Tsu02g03523 388 Gene3D - 99 188 - -
Tsu02g03523 388 CDD PBP2_Ct-PDT_like 105 282 - -
Tsu02g03523 388 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 40 387 - -
Tsu02g03523 388 Gene3D - 288 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03523 Tsu-Chr2 39541645 39546401 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03523 K05359 - gmx:100787387 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03523 02 39541645 39546401 Tsu02g03523 02 39541645 39546401 ECH