Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03498 ATGTCGGGGTTTCTTAATTCTTCTCTGAATGGATCTGCTTCAAATCTTCCAGATGGTGCTGGACGGTCTTTTGCCACGTCTTTCTCTAGTCAGTCTGGTGCAGCCTCACCAATTTTTCATCACACTGGAGGTATTCAAGGGTTGCACAATATTCATGGGAGCTTTAATGTTCCCAACATGTCTGGTACTCTCACACAAAGAAACTCCACAGTAAATAATGTTCCGTCTGGGGGTGTTCAACAACAAGCAGGAAGCCTTTCAAGTGGAAGATTTGCATCCAACAATCTCCCTGTTGGATTATCACAGCTATCTCATGGAAGTTCATATGGACATTCAGGAGTCACCAATAGAGGAGGTACAAGTGTTGTAGGAAACCTTGGATTTAGTAGTAGTACAAATGGAGTTGGTGGTTCTATTCCTGGGTTTCCTGCATCTATTGGAAATCGAAATGCTGTTCCAGGATTGGGAGTATCCCCAATTTCGGGAAATGCAGGCCCTCGAATCACTAGTTCTTTGGGAAATATGGTTGGTGGGGGGAATATTGGAAGGACTGGTGGAGGATTGTCCGTGCCTGGTCTTTCTTCCCGTCTAAATTTGAGTGCAAACAGTGGATCTGGTGCTTTAGGCATGCAAGGACAGAATCGATTGATGAGCAGTGTACTTCCACAAGGATCTCCGCAGGTGATTTCAATGCCTGGGAATTCTTATCCCAGTGCTGGAGGCCCATTTTCCCAAAGTCACGTTCATGGAGTAAATAACTTGAACACTATGAGGATGTTCAATGATGTAAATTCCAATGATAGTTCGCCTTTGGACCCAAATGAGTTCCCTCAACTGACAAGTCGTCCTAGTTCTGCCGGAGGATCTCACGGGCAGCTGGGTTCTTTACGGAATCAGGGTCTTGGCGTTAGTCCTATTGGTCAACAAAACCACGAGTTTAGCATTCAAAGTGAAGATTTCCCTGCATTACCAGGATTCAAAGGTGGTGTTAATGCAGATTATGCTATGGATATGCACCAGAAAGAACAGCTTCATGACAATGCTGTGCCAATGATGCAATCTCAACATTTCTCTCAGCAGATGGGGAGGTCTGCTGGGCTCAGTTTGGGGGGAACATATTCCTCCCATCGTACCCAACCGCAACATAATCCTTCAGTGAGTAGTGGCAGTGTCTCGTTCTCATCTGTAAATAACCAGGATCTTCTCCATCAACATGGATCAGATATTTTTCCATCTTCTCATTCTGCTTATCATCCACAGACCAGTGGACCTCCTGGAATTGGATTAAGGCCTTCGAATTCTCCAAATACAGTTTCTGGTATGGGTTCATACGACCAGCTCATCCAGCAATATCAACAGCATAAGAACCAATCCCAGTTTCATCTTCAAATGCCGTCTCTAAATCAGTCTTTTAGGGACCAGGACATGAAGTCTATGCAAGCTGCACAATCTACACCAGATCCATATGGTTTGCTTGGCCTGTTAAGTGTAATCCGGATGAATGATCTTGACCTGGCATCTCTTGCTCTTGGAATTGATCTTACCACACTTGGCTTGAATTTGAATTCATCAGAAAATCTTCACAAAACTTTTAAATCTCCATGGGCAGAAGAACCGGCTAAGGGTGATCCAGAGTTTAATGTGCCACAATGTTATTATACTGAACAACCACCTGCTTTAAATcatctttattttttgaagtttaCGGAGGAAACATTGTTTTACATATTTTACAGCATGCCGAAAGACAAAGCACAATTATATGCTGCAAATGAGCTTAACAGAAGAAAATGGTATTACCACACAGAGTATCAATTGTGGTTTACGAGAGCACCCAACGTGGAGCCGCTGGTGAAAACAAACACATACGAGAGAGGAACTTATATCTGTTTTGATCCAATTGCTTTTGACACCGTCCGCAAGGATAATGTTATTCTCCACTATGATAAGCTGGAAATGTCTCAACATTAA 1971 0.4292 MSGFLNSSLNGSASNLPDGAGRSFATSFSSQSGAASPIFHHTGGIQGLHNIHGSFNVPNMSGTLTQRNSTVNNVPSGGVQQQAGSLSSGRFASNNLPVGLSQLSHGSSYGHSGVTNRGGTSVVGNLGFSSSTNGVGGSIPGFPASIGNRNAVPGLGVSPISGNAGPRITSSLGNMVGGGNIGRTGGGLSVPGLSSRLNLSANSGSGALGMQGQNRLMSSVLPQGSPQVISMPGNSYPSAGGPFSQSHVHGVNNLNTMRMFNDVNSNDSSPLDPNEFPQLTSRPSSAGGSHGQLGSLRNQGLGVSPIGQQNHEFSIQSEDFPALPGFKGGVNADYAMDMHQKEQLHDNAVPMMQSQHFSQQMGRSAGLSLGGTYSSHRTQPQHNPSVSSGSVSFSSVNNQDLLHQHGSDIFPSSHSAYHPQTSGPPGIGLRPSNSPNTVSGMGSYDQLIQQYQQHKNQSQFHLQMPSLNQSFRDQDMKSMQAAQSTPDPYGLLGLLSVIRMNDLDLASLALGIDLTTLGLNLNSSENLHKTFKSPWAEEPAKGDPEFNVPQCYYTEQPPALNHLYFLKFTEETLFYIFYSMPKDKAQLYAANELNRRKWYYHTEYQLWFTRAPNVEPLVKTNTYERGTYICFDPIAFDTVRKDNVILHYDKLEMSQH 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03498 656 MobiDBLite consensus disorder prediction 262 307 - -
Tsu02g03498 656 MobiDBLite consensus disorder prediction 354 442 - -
Tsu02g03498 656 Pfam NOT2 / NOT3 / NOT5 family 529 651 IPR007282 GO:0006355
Tsu02g03498 656 Gene3D - 479 656 IPR038635 -
Tsu02g03498 656 MobiDBLite consensus disorder prediction 59 90 - -
Tsu02g03498 656 PANTHER CCR4 NOT-RELATED 2 652 IPR040168 GO:0030015
Tsu02g03498 656 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 2 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03498 Tsu-Chr2 39187329 39194873 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03498 K12605 - gmx:100807026 1047.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03498 02 39187329 39194873 Tsu02g03498 02 39187329 39194873 ECH