Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03495 ATGGTTCGTGGGGCTGCCAGGGGTATCACGGTTCCGACGAATTTGACAGTGTTATGGAGCTCGTTGCAGAATTTACTGCAAGAAATGGATGGAGCTAGTGGTGTGGCTGTTGATGGATCTTTCTTCCAGTCTTTGTTTAATGGACTTGTGAAGGGAGGGGAGATTTTAGGGTCTATTCGTGCTGGAGTGCATTGGACACCAGCTGTATTTGCTGTTGCTCAAAAGGAATCTGTGGATTCATTCTTTTCACAAAATTCTTTCATCAGCTATGATGTTCTGCAAAAACTTGGAATTCCCCAGCCCATTCAATTCTTGCAGTCCAGATATCCTGAAGGCAAACCTCTTGTTACAACATTTGTTCATCCATCGATGATTGAGATGCTAGATGCTGCTATTGAGGATGCTCTAGAGCGTGGTAGCTGGAGTGATTCTCTTTCCTTATTGCCCTCGTCTTTTACACCTCAAGATGCATCTAAAATGTTGTTCCTCTGTCAATCTGTACAATTGGCTCTTAAGtctAACAAAGCATACATATTTGGGGACGTTTATGTGTTGAGCAGCAGTTTTATGAAGGACATTTGTGATCGCACGGTGAAAGAATTAGAGACATTAGCTATTTCAAGGTCTTTGGGCACTGCAAAACCTGGTGATTTACCTATAGCCAATGAAGTAAAAGCAGGGTATGATTCAAGCAGGTTGAGTGAGTCCAGCGACATGGCAAGTGATGGTGGTTCCAACAAGCATGCTGATAAAgggtcaaagaagaaaaagggaaaagcCGCTGGAAATGCATTAGCAAATCAATCTGAAACTGGTCCTGATAAACAAGAACATACCACAAAATCGAAGAAAAACCAGAGAAGGGGTAAGGATACATCTTCACAAACATCAGACTCAAAGCCAGGTTCTAGGAAAGAATCACTTAAATCGAAAGAGGATGATCTCAGTAGTCCCTCAGAAGAATGGATCATGGAGAAGATTACAGCCTTGATTCCTGATTTTGAAGAACAAGGTCTTGATGATCCTGAAATGATCCTTAGGCCTTTGGCTAACAAGTTAAGGCCTACAATAATCAGTACTTGGATGGAGAAAAAGAAGGCATTGTTTAAAGACAATGCAGAAAGAATGAAACAATTGCTTGATAATTTGCAGAAGAAACTTGATGAGtCTTTCTTAAACATGCAGCTGTATGAAAAAGCCTTGGAATTGTTTGAAGATGATCAATCAACTTCTGTTGTTTTGCATAGACATTTACTAAGGACGATAGCAGCTCCTATGGTTGATATGCTTCTTCATGACTTGGACGAGCACAGCAAATTAAAGAACGGAGTTGAAGTGCAGGAATCTCCAAGTTCTGAGTCTATTTCGCTTAACCCTGGAGATAGAGCTGCAATTTCCAAGAGTTTTCCAGGAGCTCTTGCAAATAAGGCTCTTGCTGTTGTAGAAGCATTGGAAGGAAAGAGGGTGGAAACATTCATGTCTGCATTCAGAACTGTGACAGAAGAGAGTGGGTTGCCTTTGAAAAAGCTTGACAAGAAACTAGAAAGAACACTTCTACATTCATATCGTAAGGAATTGACATCTCAAGTTTCGGCTGAGACTGACCCTGTATCACTTCTACCAAAAGTTGTGTCTTTGCTTTATGTCCAGGTTCACCATAAAGCTCTTCAAGCTCCTGGAAGGGCCATTTCGGTTgctatttctcacttgaagGATAAGCTAGACGAGTCAGCATGCAAGATTTTAGCTGATTATCAAATTGCTACTGTAACTCTTTTAGCACTATTATCAGCTGCTCCTGACGATGAAAACAGTTGTGCATCTGATAGAATTCTAAGTCAAAGAGAGATTCTGGAGAGCCAAATGTCAGCTTTAAAAAACTTGGTTTTGACCACTTCACAACagtcataa 1911 0.3982 MVRGAARGITVPTNLTVLWSSLQNLLQEMDGASGVAVDGSFFQSLFNGLVKGGEILGSIRAGVHWTPAVFAVAQKESVDSFFSQNSFISYDVLQKLGIPQPIQFLQSRYPEGKPLVTTFVHPSMIEMLDAAIEDALERGSWSDSLSLLPSSFTPQDASKMLFLCQSVQLALKSNKAYIFGDVYVLSSSFMKDICDRTVKELETLAISRSLGTAKPGDLPIANEVKAGYDSSRLSESSDMASDGGSNKHADKGSKKKKGKAAGNALANQSETGPDKQEHTTKSKKNQRRGKDTSSQTSDSKPGSRKESLKSKEDDLSSPSEEWIMEKITALIPDFEEQGLDDPEMILRPLANKLRPTIISTWMEKKKALFKDNAERMKQLLDNLQKKLDESFLNMQLYEKALELFEDDQSTSVVLHRHLLRTIAAPMVDMLLHDLDEHSKLKNGVEVQESPSSESISLNPGDRAAISKSFPGALANKALAVVEALEGKRVETFMSAFRTVTEESGLPLKKLDKKLERTLLHSYRKELTSQVSAETDPVSLLPKVVSLLYVQVHHKALQAPGRAISVAISHLKDKLDESACKILADYQIATVTLLALLSAAPDDENSCASDRILSQREILESQMSALKNLVLTTSQQS 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03495 636 MobiDBLite consensus disorder prediction 274 294 - -
Tsu02g03495 636 MobiDBLite consensus disorder prediction 229 319 - -
Tsu02g03495 636 Coils Coil 366 400 - -
Tsu02g03495 636 MobiDBLite consensus disorder prediction 302 319 - -
Tsu02g03495 636 Pfam E3 UFM1-protein ligase 1 1 105 IPR018611 GO:0061666|GO:0071569
Tsu02g03495 636 MobiDBLite consensus disorder prediction 229 243 - -
Tsu02g03495 636 PANTHER E3 UFM1-PROTEIN LIGASE 1 1 634 IPR018611 GO:0061666|GO:0071569
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03495 1 599 EF-hand Containing Proteins AT3G46220 57.947 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03495 K22755 - gmx:100810221 951.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03495 02 39175220 39182759 Tsu02g03495 02 39175220 39182759 ECH