Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03430 ATGAAGAAAAAGCCTATGGAGAGTGTAAATGATCTGATTCAAGAGGTTCAACTCCGCACTCTCTGGTGGGCCATCTCTATTTTCGCCGTTTCTTATTTCCTCACCAATACAAGTAAATCAATGTGGATGAATGTACCAATGTCAATTCTATTTGTTTGTGCTCTGCGCATTCTTGTAAATAATGTGGAGTTTCGTTGGAAGGTTAGACGACCTAGATCACATACATATCTATCTCATTTGGAGAAAAAACAGTTGTCTTTGAATGATCCGCGTCTCTCAAGTGCGCCTTCCCCGGCTAAGTGGAAGAGGAAAATTGATTCTCCTGTTGTGGAGGATGCAATGAGTGATTTCATTGATAAGATTTTAAAGGATTTTGTCGTTGATTTGTGGTACTCAGAAATTACTCCGGATAAGGAGTTTCCTGACCAGATACATGCAATAATCATGGATGTTCTTGCTGAAATATCTGCAAGGGTCAAAGAGATAAACCTCGTTGACTTGTTGACCAGGGATTTAGTTGATTTAGTAGGTGACCACTTGGAACTTTTCAGAAGAAATCAAGCTGCTATAGGTGTCGATGTTATGAAAACATTATCTTCAGAGGAGAGGGATGACAGATTGAAATTCCATTTGTTGAACTCTAAGGAGCTTCATCCAGCGCTAATATCTCCCGAGAGTGAGTACAAGGTTCTTCAACGGCTAATGAGTGCACTTTTAGCTACAGTACTAAGACAACGAGAAGCACAGTGTCCTGTGATTCGCTCAATATCTCGGGAACTTTTGACGTGCTTGGTGATGCAGCCTGTTATGAATTTGGCAAGCCCTGGGTTTATAAATGAGCTGATTGAATCCCTTCTACTTCTCCTTAACGATGATGGTAAAAAGTGGATGGGCAGTGATCAGTCGACTAATGTAGCAAGCCATCATCATGGTAATTCTGTTGCTACTGGCGGCAGACATGACAATCTCACAGCCTCTACTAGTAAGCATCCATCTTTAAATCAAGGAACGGAAATGACATTGGCTAAAACAAGTGACCGGGGAGAGACATCATTACAATATAATCCACTCCATCAAGAATCTTCACAGGCCAAGCCTGCTGATTGGGCACGAATGTTGGAAGTTGCAACTCAGAGGAGATCTGAAATTCTTATGCCGGAGAATCTTGAGAACATGTGGGCGAAAGGAAGGAATTACAAAAGGAAAGAGAACAAAATTGTCAAACCCGGATTTCGGGATCTTCCCACTAAGAGTCCTGCTACTGAAAGTTCATTACCGAATAGAAAAGTGGCGCGGGAAACATTAGTGAGTAAACGTGGAAAGTATGAAGCTGCAGAAGAGAAGTCATTGGTTTTGGATCCCGTACAAAGTGTTGCAGGTACAAATAGTTCAGAATCTCCTCAAAATCCTGACAAGAAGTTATTTTTTGATGAAGAGCTTAGAGTTGATAAAGTGAAGGGTACAAAGGATGTTGCTTCTGATGGGTATAAAAGTTCACTAAAGAGGTCTAGCAGTGCTTCTGCCTTGGGAGTCCAACCTAATCAAGAAGGAGGCTCCATTATTTCAGAGTTTTTCAACCCAGAATTTGAGAGGCACAGTGGAGGATTTCGGGGAAAGAGTTCTTCTGACATGATAGTTAGGAAAGAGGGGCAGTTAGCTCCTAAGCTCCGGTGCCGGGTTATGGGAGCATATTTTGAGAAAATTGGATCTACGTCTTTTGCTGTCTATTCAATTGCCGTGACTGATGCGCAAAATAGAACTTGGTTTGTCAAAAGAAGATACAGGAACTTTGAGCGATTACATCGACAGCTCAAAGATATTCCAAATTACACATTACATTTGCctcctaaaagaatattttcctCAAGCACCGATGATGCCTTTGTACATCAACGTTGCATTCAGCTCGATAAATATCTCCAGGATCTCCTGACAATAGCTAATGTTGCCGAACAACATGAAGTGTGGGATTTTTTTAGTGTTTCCTCAAAGAACTACTCTTTTGGGAAATCTGCTTCAGTGATGAAGACCTTGGCAGTCAATGTAGATGATGCTGTGGATGATATTGTACGGCAGTTCAAGGGGGTTTCAGATGGTTTAATGCGAAAGGTTAGCGGATCACCATCCCTCCTCAACGAAGGACCTTCTGCATCTACCTCGTTGTATTTGCCATGGAATGCAGATGAATTGGATAGAAGTACCCCACAGCAAAGTGCTACAACAAGTGTGTTAAGCTCTGATACCGAGGAAGGTGATAGGAGCAGTAATTTAGGCCATGATAATATTGATAGAGAAGAAGTACAAGATAATGAATGGCAATCTGACAATGCATTGATCTCGAAGGGTTACCCATCACTGGTAACAGATCATACTGACGAGTCCAGCAACTTGAATTTTGATAGAAAGCGTGATCTGTCTGGGGAAGCAAGGGTTAGCAATGATATTCCAGCTACAAACAATAATTGGGAGGATCCTATTAGAGTGCCACCCGAGTGGTCCCCACCTAATGTTAGCGTCCCTCTTTTGAATTTGGTTGACAAGATATTTCAGCTGAAGAAAAGAGGTTGGATAAGACGACAGGTCTTTTGGATGTCAAAACAGATATTACAGTTGGTGATGGAAGATGCTATTGATGATTGGCTCCAGAGGCAGATTCATTGGCTCCGGAGAGAGGACACTGTTGCACAAGGGATTCGATGGCTCCAAGATATCCTTTGGCCTGGTGGTACATTTTTTTTGAGAGTGAGGATACCTCAGATGAGAAATAGCAGCAGTGATCAAAAGCCTTCTCAAACAGTAAGTGGATCTGGGGGACACAACGTCGCAAAACACGAATCTGGGTCTTTTGAGGAACAGCTTGAGGCTGCTCGTAGAGAAAGTGACGTCAAGAAATTGCTCTTtgACGGAGCTCCAACAACTTTAGTCAGCTTGATCGGGCATAATCAGTACAGACGTTGCGCTAGAGATATATATTACTTCAGTCAGTCTACTGTATGTATGAAGCAACTTGCCTATGCAATTTTGGAACTTCTACTTGTCTCCATCTTTCCTGAGATGAGGAATGTTGTGTTGAGTGTTCATGAGAATGTGAATGTTCACCACGCCTCATGA 3111 0.4188 MKKKPMESVNDLIQEVQLRTLWWAISIFAVSYFLTNTSKSMWMNVPMSILFVCALRILVNNVEFRWKVRRPRSHTYLSHLEKKQLSLNDPRLSSAPSPAKWKRKIDSPVVEDAMSDFIDKILKDFVVDLWYSEITPDKEFPDQIHAIIMDVLAEISARVKEINLVDLLTRDLVDLVGDHLELFRRNQAAIGVDVMKTLSSEERDDRLKFHLLNSKELHPALISPESEYKVLQRLMSALLATVLRQREAQCPVIRSISRELLTCLVMQPVMNLASPGFINELIESLLLLLNDDGKKWMGSDQSTNVASHHHGNSVATGGRHDNLTASTSKHPSLNQGTEMTLAKTSDRGETSLQYNPLHQESSQAKPADWARMLEVATQRRSEILMPENLENMWAKGRNYKRKENKIVKPGFRDLPTKSPATESSLPNRKVARETLVSKRGKYEAAEEKSLVLDPVQSVAGTNSSESPQNPDKKLFFDEELRVDKVKGTKDVASDGYKSSLKRSSSASALGVQPNQEGGSIISEFFNPEFERHSGGFRGKSSSDMIVRKEGQLAPKLRCRVMGAYFEKIGSTSFAVYSIAVTDAQNRTWFVKRRYRNFERLHRQLKDIPNYTLHLPPKRIFSSSTDDAFVHQRCIQLDKYLQDLLTIANVAEQHEVWDFFSVSSKNYSFGKSASVMKTLAVNVDDAVDDIVRQFKGVSDGLMRKVSGSPSLLNEGPSASTSLYLPWNADELDRSTPQQSATTSVLSSDTEEGDRSSNLGHDNIDREEVQDNEWQSDNALISKGYPSLVTDHTDESSNLNFDRKRDLSGEARVSNDIPATNNNWEDPIRVPPEWSPPNVSVPLLNLVDKIFQLKKRGWIRRQVFWMSKQILQLVMEDAIDDWLQRQIHWLRREDTVAQGIRWLQDILWPGGTFFLRVRIPQMRNSSSDQKPSQTVSGSGGHNVAKHESGSFEEQLEAARRESDVKKLLFDGAPTTLVSLIGHNQYRRCARDIYYFSQSTVCMKQLAYAILELLLVSIFPEMRNVVLSVHENVNVHHAS 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03430 1036 Pfam PX domain 584 661 IPR001683 GO:0035091
Tsu02g03430 1036 MobiDBLite consensus disorder prediction 731 771 - -
Tsu02g03430 1036 MobiDBLite consensus disorder prediction 922 941 - -
Tsu02g03430 1036 CDD PX_SNX19_like_plant 556 660 - -
Tsu02g03430 1036 SUPERFAMILY PX domain 556 663 IPR036871 GO:0035091
Tsu02g03430 1036 Pfam PXA domain 107 285 IPR003114 -
Tsu02g03430 1036 MobiDBLite consensus disorder prediction 731 751 - -
Tsu02g03430 1036 MobiDBLite consensus disorder prediction 922 948 - -
Tsu02g03430 1036 MobiDBLite consensus disorder prediction 752 771 - -
Tsu02g03430 1036 Pfam Sorting nexin C terminal 856 997 IPR013937 -
Tsu02g03430 1036 MobiDBLite consensus disorder prediction 299 337 - -
Tsu02g03430 1036 Gene3D - 557 671 IPR036871 GO:0035091
Tsu02g03430 1036 ProSiteProfiles PX domain profile. 554 666 IPR001683 GO:0035091
Tsu02g03430 1036 PANTHER SORTING NEXIN CARBOXY-TERMINAL PROTEIN 2 1034 - -
Tsu02g03430 1036 ProSiteProfiles PXA domain profile. 107 290 IPR003114 -
Tsu02g03430 1036 SMART PXA_3 107 290 IPR003114 -
Tsu02g03430 1036 PANTHER PX SERINE/THREONINE KINASE PXK 2 1034 - -
Tsu02g03430 1036 SMART PX_2 552 662 IPR001683 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03430 Tsu-Chr2 38397160 38406955 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03430 K17925 - gmx:100793613 1544.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03430 02 38397160 38406955 Tsu02g03430 02 38397160 38406955 ECH