Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03428 ATGGGAGAGGTGGATTCAGCTTTCATTCAAAATCCAGAAAACAGGCCAAAACTTTCCATCATCCAAGCTAAAGGAATTCCTGTAATCAATCTCTCCCCAATAATCCATCACACAGCTCAAGACTCCTCTGCCATAGAAAGCTTAGTCAAAGAAATAGCAAGTGCTTGCAAGGAATGGGGTTTCTTCCAAGTAACAAACCATGGTGTCCCTCTAAATCTAAGGCTCAGACTCGAGGAAGCTACCAAAGTTTTCTTTGCACAGAGTTTGGAGGAGAAGAAGCTTATCATAGATGATAATGGTTTTCCTGGTTATCATGATACAGAGCACACCAAGAATGTCAGAGACTGGAAAGaagtgtttgattttttatccAAAGACCCCACTTTGGTTCCTCTGAATTCTGATGAAAATGATGATGGAGTCACTCAATGGACTAATCCATCCCCTCAATACCCTCCACACTTCAAAGTTATTATTGAAGAGTATATTGAAGAGATGGAAAATCTAGGCTTTAAATTGCTAGAACTTATAGCTCTTAGCTTAGGAGTTGAAGCAAAGAGGTTTGAAGAATTCtacataaaaaatcaaactagTTTTCTCAGACTTAACCACTATCCTCCATGTCCTTACCCTCACCTTGCTCTTGGTGTTGGTCCTCATAAGGACTCTGGTGTCTTAACCATCCTTGCTCAAGATGAGGTTGGAGGACTTGAAGTAAAGCGTAAAACAGATCAACAGTGGATTCTGGTGAAGCCCACCCCAGATGCTTACATTATTAATGTTGGTGATATTATTCAGATTTGGAGCAATGACGCCTATGAGAGTGTGGAACACAGAGCAAAGGTGAACACGGAGAAAGAAAGGTTTTCTATTCCATTCTTCTTCAACCCAGGATATGATACTGAAGTCAAGCCATTGGAGGAGCTTATAAATGAGCAAAATCCTTCAAAATATAGGCCATATAAATGGGGTAAGTTTCTTGTCCACAGAAAAGACAGCAACTTCAAGAAACAAGACGTGGAGAATCTTCAAATATATCACTTTAAGCTACCCTAG 1056 0.3902 MGEVDSAFIQNPENRPKLSIIQAKGIPVINLSPIIHHTAQDSSAIESLVKEIASACKEWGFFQVTNHGVPLNLRLRLEEATKVFFAQSLEEKKLIIDDNGFPGYHDTEHTKNVRDWKEVFDFLSKDPTLVPLNSDENDDGVTQWTNPSPQYPPHFKVIIEEYIEEMENLGFKLLELIALSLGVEAKRFEEFYIKNQTSFLRLNHYPPCPYPHLALGVGPHKDSGVLTILAQDEVGGLEVKRKTDQQWILVKPTPDAYIINVGDIIQIWSNDAYESVEHRAKVNTEKERFSIPFFFNPGYDTEVKPLEELINEQNPSKYRPYKWGKFLVHRKDSNFKKQDVENLQIYHFKLP 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03428 351 PRINTS Isopenicillin N synthase signature 52 69 - -
Tsu02g03428 351 PRINTS Isopenicillin N synthase signature 220 241 - -
Tsu02g03428 351 PRINTS Isopenicillin N synthase signature 285 303 - -
Tsu02g03428 351 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 2 342 - -
Tsu02g03428 351 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE, NON-HEME DIOXYGENASE DOMAIN-CONTAINING PROTEIN-RELATED 2 342 - -
Tsu02g03428 351 Pfam non-haem dioxygenase in morphine synthesis N-terminal 26 145 IPR026992 -
Tsu02g03428 351 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 196 297 IPR005123 -
Tsu02g03428 351 Gene3D - 1 337 IPR027443 -
Tsu02g03428 351 Pfam 2OG-Fe(II) oxygenase superfamily 198 297 IPR044861 -
Tsu02g03428 351 SUPERFAMILY Clavaminate synthase-like 3 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03428 Tsu-Chr2 38355622 38358935 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03428 26 319 Glycosyltransferase AT5G59530 33.113 6.77e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03428 - - gmx:100809985 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03428 02 38355622 38358935 Tsu02g03428 02 38355622 38358935 ECH