Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03425 aTGGTTGATCTAGAAACAGAACCAAGTTCACCTTTTATTCAATCCCCAGAACATAGACCAAAATCCTCAATAATCATTGCTGAAGGTATCCCTCTAATTGATCTCACTCCCATAAACTACAAAGATGAAATCATCACCAACCCACTTTCCATTGAAGGCTTAGTCAAAGAAATAGGTAAAGCATGTAAAGAGTGGGGTTTCTTTCAAGTGATTAATCATAAAGTGCCTTTGGATAAACGTGAGAGGATTGAAGAATCTTCAAGGAAGTTTTTTGGACTTAGTTTGGATGAAAAACTTAAGGTGAGAAGAGATGAAATTAATTTGCTTGGGTATTTTGAAGCAGAGCATACCAAAAATGTTAGGGATTGGAAGgaaatttatgattttaatgTGCAACAACCAACTTTTATACCACCTTCAGATGAACAAAGTTTTCAGTTTCAATGGGAAAATCGATGGCCTCAGAATCCTCCTGAGTtcagGGAAGCATGCCAAGAATATGCAGAAGAAGTAGAGAAACTAGCTTATAAATTGATGGAACTTATTGCAATGAGCTTAGGTTTAGTACCTAATAGATTCCGTGACTTCTTCATACATAACACAAGCAATATAAGACTAAACCATTATCCACCTTGCCCTTACCCTCATCTTGCTCTTGGTCTTGGACGTCACAAAGACACTGGTGTCTTAACTGTTCTTGCTCAAGATGATGTTGGTGGTTTACAAGTTAAGAGAAAATCAGATGGAGAATGGATTCAAGTTAAGCCTATTTTCAATTCCTTCATCATTAATGTTGGTGATATGATTCAGGTTTGGAGCAATGATGCTTATGAGAGTGTAGAGCACAGAGTTATGGTGAACTCTGAGAAGGATAGATTTTCCATTCCGTTCTTTCTGAAACCAGCACTCTACACTGATGTCAAGCCCTTGGAAGAGTTGACAAACGATAGGAATCCTCCCAAATATTCACCAATCAACTGGGGCAAGTTCCGCACTGCAAGAATGCAAAGTAATTTTGCTAAATCTAATGTTGATAACCTTCAAATCTATCATTTCAAGATTTCCTAG 1068 0.3689 MVDLETEPSSPFIQSPEHRPKSSIIIAEGIPLIDLTPINYKDEIITNPLSIEGLVKEIGKACKEWGFFQVINHKVPLDKRERIEESSRKFFGLSLDEKLKVRRDEINLLGYFEAEHTKNVRDWKEIYDFNVQQPTFIPPSDEQSFQFQWENRWPQNPPEFREACQEYAEEVEKLAYKLMELIAMSLGLVPNRFRDFFIHNTSNIRLNHYPPCPYPHLALGLGRHKDTGVLTVLAQDDVGGLQVKRKSDGEWIQVKPIFNSFIINVGDMIQVWSNDAYESVEHRVMVNSEKDRFSIPFFLKPALYTDVKPLEELTNDRNPPKYSPINWGKFRTARMQSNFAKSNVDNLQIYHFKIS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03425 355 SUPERFAMILY Clavaminate synthase-like 9 339 - -
Tsu02g03425 355 Pfam 2OG-Fe(II) oxygenase superfamily 202 301 IPR044861 -
Tsu02g03425 355 Gene3D - 3 342 IPR027443 -
Tsu02g03425 355 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 301 IPR005123 -
Tsu02g03425 355 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 6 346 - -
Tsu02g03425 355 Pfam non-haem dioxygenase in morphine synthesis N-terminal 30 156 IPR026992 -
Tsu02g03425 355 PRINTS Isopenicillin N synthase signature 58 75 - -
Tsu02g03425 355 PRINTS Isopenicillin N synthase signature 224 245 - -
Tsu02g03425 355 PRINTS Isopenicillin N synthase signature 289 307 - -
Tsu02g03425 355 PANTHER GIBBERELLIN-44 DIOXYGENASE-RELATED 6 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03425 Tsu-Chr2 38329991 38332025 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03425 30 349 Glycosyltransferase AT5G59530 32.000 1.02e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03425 - - gmx:100808372 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03425 02 38329991 38332025 Tsu02g03425 02 38329991 38332025 ECH