Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03407 ATGGCCATCATGACCAACTTTGTTCCTTTCCTCACCTTATTTGTTATAATAGTAACCTCTTCAATGTTTACAGTTACTATGGCAAACAAAGATTGGCCCTCCTTTGGTAATTTTAACTACACTGATTGGTGGTCTAGATTTGgcaaccatcatcatcaaattaataaaacagAACAACAGCCTAAGAATATCATTGTGGGTGACTCTCAAAATTGGCACTTTGGTTATAACTACTCTGATTGGGCCCTCAAGAATGACCCTTTTTACCTCAATGACACTCTCGTTTTCAAGTATGATGCTCCAAATGCAACTAGCTTTCCACATAGTGTGTACATGTTTCCAACATGGAAGAGCTTCAAGAATTGTGATGTTAAGAGGGCTAAGATGTTGGCAAATCACACACAAGGTGTTGGAGAGGGATTCAAGTTTGTGTTAAACAAATGGAAGCCTTATTACTTTGCATGCGGTGAGAAAAATGGATTACATTGCAACGTTGGACAAATGAAGTTCACCATTATGCCAATGCTTCGCCCCTTATGGCCATCATGGCCTTGA 555 0.3766 MAIMTNFVPFLTLFVIIVTSSMFTVTMANKDWPSFGNFNYTDWWSRFGNHHHQINKTEQQPKNIIVGDSQNWHFGYNYSDWALKNDPFYLNDTLVFKYDAPNATSFPHSVYMFPTWKSFKNCDVKRAKMLANHTQGVGEGFKFVLNKWKPYYFACGEKNGLHCNVGQMKFTIMPMLRPLWPSWP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03407 184 SUPERFAMILY Cupredoxins 62 174 IPR008972 -
Tsu02g03407 184 Pfam Plastocyanin-like domain 72 167 IPR003245 GO:0009055
Tsu02g03407 184 PANTHER GLYCINE-RICH PROTEIN-LIKE 12 178 - -
Tsu02g03407 184 Gene3D - 60 175 IPR008972 -
Tsu02g03407 184 ProSiteProfiles Phytocyanin domain profile. 62 176 IPR003245 GO:0009055
Tsu02g03407 184 PANTHER BNAC04G19690D PROTEIN 12 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03407 Tsu-Chr2 38106400 38107336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03407 56 172 Miscellaneous Gene Families AT3G27200 30.508 1.08e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03407 - - mtr:MTR_4g086750 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03407 02 38106400 38107336 Tsu02g03407 02 38106400 38107336 ECH