Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03400 ATGACTGAGTATTGGGTAAGTCAGGGAAACAAATGGTGTGATgtttgcaaaatttatatatcaaACAACCCTTCCAGCATCAGAAATCATGAGCTTGGAACACGTCACAAGGACAATGTTACTAAGCGGCTTGCTAATATGAGAAAAGAGAATGCTGCTAAAGATAAAGAACACAAGGAAACAGCTAATGCGCTTGAGCAAATCGAAGCTAGAGCACAACGTAGCTATCAAAAGGATAAGGCAAAATTTGAGGAAGCCAAAGAATCACATGAATTGGATTCCCAAATTGAATGGGAGTTTGACAGCACTTCAGGCTATTACTACCATAAAACAAATGGATTTTGCTATGATCAAAAGTCAGGATTTTACTATTGTGATGCAATTGGCAAATGGGTGACCCATGATGAAGCATATGCCTCACCTCACTTTTCATCAAATGCTGGGTGGAATGTGCCATCTGGAAAAAAGGGCTCCATAATTTTGCATTCCAAATCAGTTGACATCAAACCAAATAAACATCATAATGTAGCTTTACCTCTTAGAGTGAATCCCATGAGAAGTGCAAAAGCCGCCGCCGCGTCATCTCTTGCTGTCGGTAAGAGAAAGAGACTCGATGAAAAACCCAAAGTTGTATcggaagaagaaaaacaagCTCTCAAGGCAAGAGAGGCTGCAAGGAAAAGAGTGGAACAGAGGGAGAAACCTATGCTTGGGCTATACAGCAAGCCTTACTAA 735 0.3918 MTEYWVSQGNKWCDVCKIYISNNPSSIRNHELGTRHKDNVTKRLANMRKENAAKDKEHKETANALEQIEARAQRSYQKDKAKFEEAKESHELDSQIEWEFDSTSGYYYHKTNGFCYDQKSGFYYCDAIGKWVTHDEAYASPHFSSNAGWNVPSGKKGSIILHSKSVDIKPNKHHNVALPLRVNPMRSAKAAAASSLAVGKRKRLDEKPKVVSEEEKQALKAREAARKRVEQREKPMLGLYSKPY 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03400 244 Pfam U1 zinc finger 11 43 IPR013085 GO:0008270
Tsu02g03400 244 SUPERFAMILY beta-beta-alpha zinc fingers 12 56 IPR036236 -
Tsu02g03400 244 ProSiteProfiles Zinc finger matrin-type profile. 11 42 IPR000690 GO:0003676|GO:0005634|GO:0008270
Tsu02g03400 244 Coils Coil 212 232 - -
Tsu02g03400 244 Coils Coil 37 71 - -
Tsu02g03400 244 MobiDBLite consensus disorder prediction 198 244 - -
Tsu02g03400 244 PANTHER WW DOMAIN BINDING PROTEIN 4 1 167 IPR040023 GO:0000398
Tsu02g03400 244 SMART ZnF_U1_5 8 43 IPR003604 GO:0003676|GO:0008270
Tsu02g03400 244 Pfam OCRE domain 97 144 IPR041591 -
Tsu02g03400 244 Gene3D Classic Zinc Finger 9 87 - -
Tsu02g03400 244 MobiDBLite consensus disorder prediction 199 235 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03400 K13220 - gmx:100804274 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03400 02 38045686 38051060 Tsu02g03400 02 38045686 38051060 ECH