Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03352 ATGTTTCCTTGGAACATTGCTAAATCCGCGGAAGCTATGTTCTCCCGTTGGGCTCTTAAGCGGGTTTGCAAATTCTTTCTTAAGAAGAAATTGGGGCAATTTATTCTCGGTGATATCGACCTTGATCAGCTCGATGTTCAACTTTCTCAAGGAACTATTCAGCTTACCGATCTTGCTCTTAATCTTGATTTCATTAACGCCAAGCTTGGTAAAACAGCATCTGTAATGGTAAAAGAAGGATCAATTGGATACTTGTTGGTTAAAATGCCTTGGAGTGGCGAAGGTTGTGAGGTTGAAGTGAATGAGCTTGAACTTGTAGTTTCTCCGTGCATAGATAAAATCTCGACAACTGAAGATGAAGTTGGTAGTTCCGATGTTGATAAAGATAGTTGTGAAATCAAATATAGTTCAAACAAGACCAAGCAAGAAACAGTAGATGATGCTATGAAGTCAATTTCAGTGGATGTTCATGAAGGTGTGAAAACTATTGCAAAGATGATAAAGtggttgcttacaagcttccatGTGAAAATAACAAACGTGATTGTTGCATTTGATCCGTCATTGGAAAATGAAGCAAAGGAAATAGATAGTAATCGGACTTTAGTTCTTCGGGTTTCTGAAATACAGTGTGGAACAAGTTTATCTGAAGATACCGAGTCTAATGTTGATGTCCTTGGAATAAGCCAGTTGACAAACTTTGTGAAGTTTGATGGGGCAGTACTTGAGATTCTCAAAATAGATAATGAAAATAACCAGTTACCCATTCAGCATGTGTCGGAGGCAGGATGTGGTGATCCTATTTTGGGATCAAATAAATCCACATGTCCGGTCATGACTGGGAAGCAAGGTGGATTTGGTGGAATTGTAAAATTAAGTATTCCTTGGAAGAATGGTTCTTTGGACATTTGCAAGGTGGATGCAGATGTTTGTGTTGATCCGGTAGTGTTAAGATTTCAACCTAGCTCAATTGAATGGCTATTGAAATCATGGGGAActcttaaaaatttgaataaggATGCCAAAGGTTGCAAGAACCACAACGTAAGAGGATCTTCCCATTTAAATTCTGCATTGTTGTGTCCTTCATCAACTTCAGTTTCTATTACCAATGTCACTGGTGAAATGAAAACTAGCCATGGTAGTTTGACCGCCAATTGTTCCTCCTTGACTAAACCAGAAGATCCAGAATCCCTCACCGAAGCTTCGCTTCCTGCTGCTAATCTTATTTCTGATTGGGTGCCATTTTCTACTTATCAAAATCTTAAAGATGGCATTCAAGAACCTGATTTTGGGGCAAGTGTGGACCAGTTTTTTGAATGTTTTGATGGAATGAGGAATTCTCAATCTGCTTTAGGGAGTAGTGGAATGTGGAATTGGACTTGTTCGGTCTTCAGTGCTATTACCGCTGCATCCAGCCTTGCCTCTGGATCTTTGCATATTCCCTCCGAACAGAGACACATGGAAACCATTCTCAGGGCTACTTTTTCTGGAGTATCTGTTGTTTTGTCCTTCTGTGATGATGGACAGAGCCATTTTTATGGGCATAAAATTGGTAACACTGTTGGATCACAGATTGATTATCTTGGTGCAGAGTGCAATGAAATTGTTGTTGCCTTGAAGGTATGTCCACAAATGACGACTTTTGATGGAACAGTGAAGCATGTAGAGGTTGCTAATTTTTCGAACATTGGGAATGATGCCGAAAATCGAAGTACTTTGATTGGACACCTACAGACTAAGGTCCTTGATGCTCTCCCTTTGTCTACCTCTTACAATCTATATTCAGATTCATTAATTGGGCCAGTTGCAACAGACTTTCCATTTGGAAACAAGGATTGCTTACTGAAAGTTACATTGTTTAAAACTTCTGGTGTCACCAATTGCAAATTTACTGTGCAATCAAGTTCTTCAGATGGTTGTGTGACTAGGCTGACATCATTCTCACTGAACCTGCCCCCATTTATTTTCTGGGTAATACTTTCTGTGATAAATCTGCTCACTAACCTGCTAAAGGAAATTGAAAAATCACTTGAAGTGCATAATAAAGCAGACGAGATTTTTTCTGAAGTGTCAGATGAAAAGTTTGGGTTATCTCAAAATGATGCGAAGGGAAGTTTCAGTCCCTGTGTGACATCCTTCTCCACAACAGAATGTTTGCATGGTGATATATCAATTTCTAGTGCAAGAGTAATACTGTGTTTTCCTTTTGAAAGGGATGGAGATCATGCAGCTTCATTTTCATGGGAAAAGTTCATTGCTCTTGATTTTACTTCATTGTCACCTTTGAACAGGGGTTGCACCCGAGATGGCAGCCAAACTTCAAGTGCAAGTTCAAATAAAAGATTTCCTTCTGTAGCAGCACAATCTCTTCAGTTGAATTTCTGTGATCTAGATATATACTTGATCACATCAAGACGTAACGACAGTGATAGAATAAGCTCCAATGATGTGAAGAATGAGAGATTTTTTAGCAGCTGCTTTCTTTCCATTGCTCGCAGAAGGGGTTGTTTCTCTGTTTTTCGTATGGTTTGGCAGGAGGGTCAAGTGACTGGTCCTTGGATTGCTAAGAAAGCTAGATTATTTGTCAATTCAGACCAATCAATGGGAAAAGATGATATTGCTGGAAGAGGGTATGAGTATGCATCTGCATCAACGGTGAAAGATTTGGAAGATTGGAAATCTCAAACTCAACAAGAGATGATACTAAGCTCGTCACTTCTAATGCACGTTCATCTATCTCACGTTGTGATTAATGTGAATGATTCTCAATATAAAGGTATATACCAGCTTTTTCTTCAGATGCTAAATGCAATGACATGTGGGACTTCTCAGGAAGCCAATGTGGATAAAAAGTCTTCAGTTTCACAATCATCAGTATTTTTGGAATGTGATTCTGTAGAAATTCTTATTAGTACGGATACATCTGAAAGCATCAAAAGTTCAATCAAGAGTGAGCTTCCCGGACAATGGCATCAATTCAAGCTGAAGGTTCAAAGGTTTGAGTTGTTGTCTGTCACTAATACAGGTGGTGTTAAGGATGCGAGTTTCTTCCGACTAACCCATGGCGAAGGCAAGTTGTCCGGGTTTGTTACTGGAGTTCCTGATCACGAGTTTATTCTGGTTACTTGCAACAACACCTCTGTGAAGCGAGGCAATGGGGGAGGTTCTAATGCGTTATCTTCTAGATGTGCTGGTTCTGATATCATGTTTCTATCTGACCCAGAGATTTCTCATAAAATTACATCTATTGCCGTCAGCTGCGGCACAGTTATTGCTGTAGGCGGTCGTCTGGATTGGTTTGTTGCAATATCATCCTTTTTCAGTTTGCCTGGTTCTAATACTAAAGATGCAAATGATACTAGTATTTCAAAGAGGGAGCAAGATATCTCTTACACGACCTGTTTTGTTCTCAGCTTGATTGATATTGCTTTGAGTTATGAGCCCTATACGAAAAATCTTGTTCAGACTGAGGTCCTTAATTCCGAGTCTGGCTTTTCTTGTATCAAAGAAGATACGGGGGAACAATGTGTTTCTTGTCTGTTGGCTGCATCCAACTTGTCTCTTTCAAATTCATCTATGGCAGATTCAGTTGAAAGTGTTTTCCAAATTAGAGTGCAAGACCTGGGGCTTCTGCTTCATTTAATATCAAAGCATGATTCTCTTCCTGGCACTTATAGTGTAGAACATCTTCAAAAGTCGGGTTATGTTAAAGTTGCTCAGGAGGCTTTTCTGGAGGCAATGTTGAAAACCAATTGTGCTAGTGGTCTTCTTTGGGAACTAGAATTATCTAAATCTCACCTTTATGTGGAAACTTGTTATGATACAACGGCTGCTCTGATTCGTTTGGCTGCTCAACTTCAGCTATTATTTGCCCCTGATGTGGAGGAGTCCATTGTGCATTTGCAGAATAGGTGGGATAATGTTCAACAAGCACAGCAAAGCAATGAatttaataatgaaattaaGGATCTCAGACGTGACACAATGGCTTCAACTTCAGAGCAGTGCTCCCCAAAAACATATTCAAACGATGGATCTAGTATAGCTGGCTTGATGGATGAAATATGTGAAGATGCATTTCAAGTGAATGACAATAATGCATGGCAATCATATTCTTTTGAATCAGGATTTTACATGCCACTTGAAGAAAGCTTAATTGATGGTAAGATGAATTTGGATGAGCCTGAAGTTCTCTCTCCTGAATTAATGTTGAATGAGTCAGTGCCTGTAATAGGACCAGAAGGTAGTCAGACTTCATTTCTGCATGACGGATGCTTTCCGGAGATTATAGAAAGCTATTGTTTGTCTGACTTACGCCCTCTCTCGGAGCTATCTATAGATATACATTCTGACGAGCTTTCCAAAATAAAGCTGAGGAATGTGTCACATAGAGATATTGAAAGAGGAAGTGGTGGATGGTATGGAGGCAACTCAACAAAAGTATTAGAAAACCACATTTCAGAGGAAAATGGAAAAACTGGGCCGATGAAGGCCGCAGATCATGGCACACTTAATTCTAATGATTGCTCATCTCACAGCGAGACTTGTGGACGtgtaattttaaagaaaattgatATAAGATGGAAAATGTTTGGTGGGTCTGACTTTGTTGATTCAGATAAAAATGGACAACATTCTGGGAGGAACACATCTACTTGCTTGGAATTTGCATTGTCTGGGATGAAATTTCAGTATGATACATTTCCTGTTGGTGGACTACATGTATCAAAAATGTATTTGTCTGTTCAAGATTTTTATCTCTATGACAGAAGCCAAAATGCACCTTGGATACTGGTGCTGGGATATTATCACTCAAAGGGTCATCCGAGGGAATCTTATTCAAAAGCATTTAAGTTGGACTTGGAGGCAGTTAGACCAGATCCTTTAACTCCCCTTGAGGAGTACAGGTTAAATGTTGCTTTTCTACCTATGCTATTACATCTACATCAGTGCCAGCTTGATTTTCTTGTTGATTTCTTTGGGAAGAAAAACTCATCAAATGACCAGTTTCCTAATAATTGTCATGATTTGGAGGGTTCAAAATCATTTCCTGAGAGGAGTGAAGATCGTGGATGCCATTCAATTGCACAAGAGGCATTGCTTCCATACTTCCAGAAGCTAGATATTCGGTCTATTATTGTCCGGGTGGATTACAGTCCTAGTCGTGTAGATCTAGCAGCATTAAGCCGTGGGAAATATGTAGAACTTGTAAATCTTATCCCTTGGAAGGGTGTTGAGCTTAACCTGAAACATGTTCATGCTTCTGGCATCTATGGCTGGGGCAGTGTTTGTGAAACAGCTTTAGGGGAGTGGTTGGAAGATATATCTCAGAATCAGATTCATAAAATATTGCGGGGGCTTCCTACTGTACGATCATTAATTGCTGTTGGGACTGGTGCTGCTAAACTGATTTCATCGCCTGTAGAGAACTATAAGAAGGAGGGGAGAGTGATCAAAGGTTTGCAAAGAGGTACAATTGCATTTCTTAGAAGCATTTCTCTTGAAGCTGTTGCACTTGGAGTTCATCTAGCTGCTGGTGCCCATGACTTTCTTCTCCAAGCAGAATATAGTCTTTCAAGCATACCTTCTTCAGTTTCTTTGCCTGTAAAAGATAAATCAAACACAGGTGCTCGATCTAATCAACCTAAGGATGCCCAACAAGGAATTCAACAGGCTTGCGAGAGTCTCAGTGATGGCCTGGGAAAATCTGCTGCGGTGTTAGTTCAGAACCCCTTGAAAAAGTTCCAGCGCGGTTCAGGTGCAGGACCTGCCTTGGCTGCTGCTGTTCGAGCAGTTCCTGCAGCTGCCATAGCTCCTGCTTCGGCTTGTGCAAGTGCTGTACACTATGCTCTTCTTGGATTTAGAAATAGCCTTGATCCTGAACGCAAAAAAGAGTCCATGGAGAAATATTGTCCTACACAACCCTGGGAAGAAGACTGA 5943 0.3986 MFPWNIAKSAEAMFSRWALKRVCKFFLKKKLGQFILGDIDLDQLDVQLSQGTIQLTDLALNLDFINAKLGKTASVMVKEGSIGYLLVKMPWSGEGCEVEVNELELVVSPCIDKISTTEDEVGSSDVDKDSCEIKYSSNKTKQETVDDAMKSISVDVHEGVKTIAKMIKWLLTSFHVKITNVIVAFDPSLENEAKEIDSNRTLVLRVSEIQCGTSLSEDTESNVDVLGISQLTNFVKFDGAVLEILKIDNENNQLPIQHVSEAGCGDPILGSNKSTCPVMTGKQGGFGGIVKLSIPWKNGSLDICKVDADVCVDPVVLRFQPSSIEWLLKSWGTLKNLNKDAKGCKNHNVRGSSHLNSALLCPSSTSVSITNVTGEMKTSHGSLTANCSSLTKPEDPESLTEASLPAANLISDWVPFSTYQNLKDGIQEPDFGASVDQFFECFDGMRNSQSALGSSGMWNWTCSVFSAITAASSLASGSLHIPSEQRHMETILRATFSGVSVVLSFCDDGQSHFYGHKIGNTVGSQIDYLGAECNEIVVALKVCPQMTTFDGTVKHVEVANFSNIGNDAENRSTLIGHLQTKVLDALPLSTSYNLYSDSLIGPVATDFPFGNKDCLLKVTLFKTSGVTNCKFTVQSSSSDGCVTRLTSFSLNLPPFIFWVILSVINLLTNLLKEIEKSLEVHNKADEIFSEVSDEKFGLSQNDAKGSFSPCVTSFSTTECLHGDISISSARVILCFPFERDGDHAASFSWEKFIALDFTSLSPLNRGCTRDGSQTSSASSNKRFPSVAAQSLQLNFCDLDIYLITSRRNDSDRISSNDVKNERFFSSCFLSIARRRGCFSVFRMVWQEGQVTGPWIAKKARLFVNSDQSMGKDDIAGRGYEYASASTVKDLEDWKSQTQQEMILSSSLLMHVHLSHVVINVNDSQYKGIYQLFLQMLNAMTCGTSQEANVDKKSSVSQSSVFLECDSVEILISTDTSESIKSSIKSELPGQWHQFKLKVQRFELLSVTNTGGVKDASFFRLTHGEGKLSGFVTGVPDHEFILVTCNNTSVKRGNGGGSNALSSRCAGSDIMFLSDPEISHKITSIAVSCGTVIAVGGRLDWFVAISSFFSLPGSNTKDANDTSISKREQDISYTTCFVLSLIDIALSYEPYTKNLVQTEVLNSESGFSCIKEDTGEQCVSCLLAASNLSLSNSSMADSVESVFQIRVQDLGLLLHLISKHDSLPGTYSVEHLQKSGYVKVAQEAFLEAMLKTNCASGLLWELELSKSHLYVETCYDTTAALIRLAAQLQLLFAPDVEESIVHLQNRWDNVQQAQQSNEFNNEIKDLRRDTMASTSEQCSPKTYSNDGSSIAGLMDEICEDAFQVNDNNAWQSYSFESGFYMPLEESLIDGKMNLDEPEVLSPELMLNESVPVIGPEGSQTSFLHDGCFPEIIESYCLSDLRPLSELSIDIHSDELSKIKLRNVSHRDIERGSGGWYGGNSTKVLENHISEENGKTGPMKAADHGTLNSNDCSSHSETCGRVILKKIDIRWKMFGGSDFVDSDKNGQHSGRNTSTCLEFALSGMKFQYDTFPVGGLHVSKMYLSVQDFYLYDRSQNAPWILVLGYYHSKGHPRESYSKAFKLDLEAVRPDPLTPLEEYRLNVAFLPMLLHLHQCQLDFLVDFFGKKNSSNDQFPNNCHDLEGSKSFPERSEDRGCHSIAQEALLPYFQKLDIRSIIVRVDYSPSRVDLAALSRGKYVELVNLIPWKGVELNLKHVHASGIYGWGSVCETALGEWLEDISQNQIHKILRGLPTVRSLIAVGTGAAKLISSPVENYKKEGRVIKGLQRGTIAFLRSISLEAVALGVHLAAGAHDFLLQAEYSLSSIPSSVSLPVKDKSNTGARSNQPKDAQQGIQQACESLSDGLGKSAAVLVQNPLKKFQRGSGAGPALAAAVRAVPAAAIAPASACASAVHYALLGFRNSLDPERKKESMEKYCPTQPWEED 1980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03352 1980 Pfam N-terminal region of Chorein or VPS13 19 120 IPR026854 -
Tsu02g03352 1980 PANTHER AUTOPHAGY-RELATED 2, ISOFORM A 13 1971 IPR026849 GO:0006914
Tsu02g03352 1980 Coils Coil 1308 1328 - -
Tsu02g03352 1980 Pfam Autophagy-related protein C terminal domain 1879 1971 IPR015412 -
Tsu02g03352 1980 MobiDBLite consensus disorder prediction 1870 1893 - -
Tsu02g03352 1980 Pfam Autophagy-related protein 2 CAD motif 1225 1294 IPR026885 -
Tsu02g03352 1980 PANTHER AUTOPHAGY-RELATED 2, ISOFORM A 13 1971 IPR026886 GO:0006914|GO:0030242
Tsu02g03352 1980 Coils Coil 664 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03352 Tsu-Chr2 37525459 37538053 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03352 K17906 - gmx:100805552 2988.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03352 02 37525459 37538053 Tsu02g03352 02 37525459 37538053 ECH